Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 473 a.a., Type I secretion membrane fusion protein, HlyD from Pseudomonas syringae pv. syringae B728a

 Score =  155 bits (391), Expect = 3e-42
 Identities = 120/429 (27%), Positives = 199/429 (46%), Gaps = 53/429 (12%)

Query: 16  DQAVFRAGRIITLCALMLAAF-LAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQ 74
           D+    A R+     +  AA  L WA   ++  V+T +GK+IPS + + IQS E  +V  
Sbjct: 48  DKPSHPAPRVFMWAIMFFAALALLWACLGKIDVVATASGKIIPSGKTKTIQSSETAVVKA 107

Query: 75  MSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQA------------EV 122
           + V +G  V+ GQ+L +LD T   + VG   +   AAR   AR  A            ++
Sbjct: 108 IHVRDGQSVKAGQLLLELDSTSADADVGRVRSDLLAARIDSARAAAMLDAINQRKPPRDL 167

Query: 123 TGKPLTFP---------------ESLRDSPDLIDAETALYQTRRRGLEQTLAGIQDSLQL 167
           TG  L                  +  R S DL+DAE    Q   +     +  +Q +L +
Sbjct: 168 TGTILDADPMHVLAAERWLQGQYQEYRSSLDLVDAEIQQRQADIQAARIQVMSLQKTLPI 227

Query: 168 VRSELKITENLAKMGASSRVEVIRLNRQRSELELKANEARSDYL--VRAREELAKAS--- 222
                   ENL K    +R   +   + R +LE + +  ++  L    AR+E  +     
Sbjct: 228 ATKLASDYENLLKKQYIARHAYLEKEQARLDLERQLSVQQASVLQSTAARQEAERRREGV 287

Query: 223 ------AEADALSEV---IRGRSDSLTRL-------TLRSPVRGIVKDIEVNTLGGVVQP 266
                 A  D L +    I   +  LT+        TL +PV G V+ + V+T+GGVV P
Sbjct: 288 VAQTRRAMLDLLQQADQKIASFNQDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTP 347

Query: 267 GGQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDT 326
              +M +VP  + + +E  +  +D+ F+   QA  VK+  + ++ YG ++G+V+ +S D 
Sbjct: 348 AQPLMVLVPDGQPVEVEAMLENKDVGFVRAGQAVTVKVETFTFTKYGTIEGEVISVSNDA 407

Query: 327 LQDEVKPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNR 386
           ++DE +  IY  +  IR   D+L N  G    + PGM  T ++ T ++ +++Y + PL +
Sbjct: 408 IEDEKRGLIYSSK--IRLNSDTL-NVNGVDIKLSPGMAVTAEVTTNKRRVIEYFLSPLQQ 464

Query: 387 -AKEALRER 394
            A E+ RER
Sbjct: 465 HASESFRER 473