Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 440 a.a., Type I secretion membrane fusion protein, HlyD from Pseudomonas syringae pv. syringae B728a

 Score =  143 bits (361), Expect = 8e-39
 Identities = 115/419 (27%), Positives = 192/419 (45%), Gaps = 61/419 (14%)

Query: 16  DQAVFRAGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQM 75
           D+ + R G  +T+  +    F  WAA   +     G+G V+  S  + +Q  EGGIV ++
Sbjct: 20  DRGIRRIG--VTIVLVTFGLFGTWAALAPLDNAVYGSGLVMVQSYRKTVQHLEGGIVKEL 77

Query: 76  SVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKP------LTF 129
            V +GD V +G  L  LD ++  S    +  +  + +A +ARL+AE    P      +T 
Sbjct: 78  LVRDGDTVHKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPPLTITG 137

Query: 130 PESLRDSPDLIDAETALYQTRRRG--------------LEQTLAGIQDSLQL-------V 168
            +S+R + + I  E  ++ TR+                L+Q ++G++D ++         
Sbjct: 138 TDSVR-AKEAIAGEQQVFSTRKNSRLTEISVQRERIGQLKQQISGLRDMIRTKVSLEKSY 196

Query: 169 RSELKITENLAKMGASSRVEVIRLNR---------------------QRSELELKANEAR 207
            SE+   ++L   G   +  ++   R                     Q SE EL+  +  
Sbjct: 197 SSEITELKDLLSQGFVDKQRLLEQERKLDMLKSEVADHESTITKTQLQISETELQIIQLN 256

Query: 208 SDYLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPG 267
            ++     +EL+   A+   L E      D L+R+ +R+P  G+V D++V+T+GGVV  G
Sbjct: 257 KNFSSDVAKELSDVQAKVFDLQETANALQDRLSRVVIRAPEDGMVLDMKVHTVGGVVSAG 316

Query: 268 GQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTL 327
             ++ IVP    L++E  +A  DI  I   +   V  SA++ +    ++G+V  IS D L
Sbjct: 317 TPLLDIVPESSELVVEAHVAITDIDRISIGKLTDVHFSAFNSATTPVIEGEVTRISADRL 376

Query: 328 QDEVKPEIYYYRVFIRTEQDSLQNKAGKRFA---IVPGMIATVDIRTGEKTILDYLIKP 383
           +D+     Y  RV        L  K  KR     + PGM A V I  GE+T+L YL+KP
Sbjct: 377 KDDAGEPYYLVRV-------KLTEKGMKRLGDRKLQPGMPAEVLINAGERTMLQYLLKP 428