Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 567 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 89/359 (24%), Positives = 156/359 (43%), Gaps = 52/359 (14%)

Query: 57  PSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQA 116
           P    +++Q+   G V Q++V     V++G  +  +D ++    + + +    +   +Q 
Sbjct: 221 PIGETRLVQAAVEGKVRQIAVRSNQEVQQGDPIIVIDDSQ---QITKRDQLIDSIAKNQL 277

Query: 117 RLQAEVTGKPLTFPESLRDSPDLIDAETALYQTRRRGLEQTLAGIQDS---LQLVRSELK 173
           +LQ   + K     E L +S  +            RG++   A IQ +   L L   E  
Sbjct: 278 KLQQIESQKAAIAEEMLAESNKVA-----------RGIDVNQADIQTAEANLALAADEYS 326

Query: 174 ITENLAKMGA-----------SSRVEVIRLNRQRSELELKANEARSDYLVRAREELAK-- 220
             + L+  GA           S RV    L+R R   EL A         +AR    +  
Sbjct: 327 RYQTLSNAGAIADLLVQEKLASFRVAQANLSRAR---ELTAQTEEQGLATQARLRQMQDQ 383

Query: 221 -ASAEADALSEV------IRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKI 273
            A  E++ L ++      ++  + +L    +R+P+ GI++ I +     VV  G +V +I
Sbjct: 384 LAQQESETLQQIKVEQKELQQMNINLANTVVRAPISGIIQSINLRNPDQVVGVGQEVARI 443

Query: 274 VPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDT------- 326
            P    L I+  +  ++I  +   Q  +++I+A  Y  +G LDGKV  I+PD+       
Sbjct: 444 FPTQSGLTIKALVPSQNILPVALGQRVQLRIAACPYPDFGTLDGKVQAIAPDSGGSSSSA 503

Query: 327 --LQDEVKPEIYYYRVFIRTEQDSLQNKAGKRFA-IVPGMIATVDIRTGEKTILDYLIK 382
               + V      Y V I+ E  SL +  G+R   I PGM A  DI T E+T+L ++++
Sbjct: 504 AQTNEPVAANSQAYEVTIKPEDRSLTD--GQRVCKIRPGMDAEADIITNEETVLKFMLR 560