Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 439 a.a., HlyD family protein secretion protein from Sinorhizobium meliloti 1021

 Score =  155 bits (391), Expect = 3e-42
 Identities = 122/419 (29%), Positives = 196/419 (46%), Gaps = 54/419 (12%)

Query: 26  ITLCALMLAAFLA-WAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVE 84
           +++ AL L A +  WAA  E++      G VI     + +Q   GGIV ++ V EGD VE
Sbjct: 23  VSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGIVGELLVKEGDRVE 82

Query: 85  RGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKP-LTFPESLRD------SP 137
            GQVL +LD T   +++   E+      A +ARLQAE  G       E L +      + 
Sbjct: 83  AGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQAERMGAASFEIEEDLAEFIPGTAAA 142

Query: 138 DLIDAETALYQTRR---------------------RGLEQTLAGIQDSLQLVRSELKITE 176
            LI+ E  L+ +RR                      GL   L  I+++L+L+  EL   +
Sbjct: 143 KLIEGEQRLFASRRSALSGMKGQLDSRKAQLADEVEGLTVQLNAIEEALKLIAEELTGVD 202

Query: 177 NLAKMGASSRVEVIRLNRQRSELE---------------------LKANEARSDYLVRAR 215
           +L   G      V  L RQR+ELE                     L+  +   D      
Sbjct: 203 SLFGQGLVPMQRVTTLKRQRAELEGGRGRHIAARAQARGKSSEIDLQILQLDEDRRSEIS 262

Query: 216 EELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVP 275
           +EL    A+     E     +D L RL + +P+ G +  + ++T+ GV+ PG  +M +VP
Sbjct: 263 KELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLAIHTVNGVINPGETLMLVVP 322

Query: 276 MDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEI 335
             E L +E ++A  DI  I   Q+ +++ SA++      ++ +VV ++PD + DE +   
Sbjct: 323 EAEDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRTTPEVEAEVVTVAPDLVTDE-RTGA 381

Query: 336 YYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPL-NRAKEALRE 393
            YY + IR + +SL    G   ++ PGM A V I+  ++T++ YL KPL ++ + A RE
Sbjct: 382 SYYPLRIRPKAESLAKLKG--LSLYPGMPAEVFIKIADRTVISYLTKPLTDQMRHAFRE 438