Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 473 a.a., HlyD family protein secretion protein from Sinorhizobium meliloti 1021

 Score =  142 bits (358), Expect = 2e-38
 Identities = 115/417 (27%), Positives = 193/417 (46%), Gaps = 53/417 (12%)

Query: 26  ITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVER 85
           +T   +    F  WA   E++  S  +G ++  S+ + +  FEGG++ ++ V EGD V  
Sbjct: 60  LTTILVAFGGFFGWAFSTELSSASVTSGTIVVDSKRKTVSHFEGGVLGRILVQEGDHVAP 119

Query: 86  GQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTG-KPLTFPESL----RDSPDLI 140
           GQ L +L+ T+  S +   +++     A  ARL+AE  G   ++FP  L      + D +
Sbjct: 120 GQPLMKLEDTRARSDLQALQSRRVGLIAKLARLRAERAGLHAVSFPADLVSEGEAAADAV 179

Query: 141 DAETALYQTRRRGLEQTLA---------------------GIQDSLQLVRSELKITENLA 179
            AE A ++ R    E  LA                          ++L+  +      L 
Sbjct: 180 TAEKAFFEKRSEAKESRLAIQRKTIEEYSEKAKSLTAQLQATDRQIELMNEQRTAIATLV 239

Query: 180 KMGASSRVEVIRLNRQRSEL-----ELKANEARSDYLVRAREELAKASAEADALSEV--- 231
           +   + R ++I ++ + SEL     EL  ++A+++  + A  ELA    E+D  SE+   
Sbjct: 240 EKAFAQRSKLIEIDARLSELAATRGELAGDKAQAEKAM-AGAELALIGIESDFQSEIAGE 298

Query: 232 --------------IRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMD 277
                         I    D L RL +R+P  GIV +I++ T G  V PG  ++ IVP D
Sbjct: 299 ITTARLELAEVEQRITAAEDVLRRLEIRAPQAGIVANIQLRTPGSAVTPGQPLLDIVPED 358

Query: 278 ERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYY 337
           E LL+E  ++ RDI  I    + +++++AY+   +  L+GKV  I+ D   DE K  + Y
Sbjct: 359 EPLLVEMHVSTRDIDSITIGSSTQIRLTAYNQRSHLPLEGKVTYIAADQSVDE-KSNVAY 417

Query: 338 YRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRA-KEALRE 393
           +        +SL   A     + PGM A V I    ++ +DYL+ P++ +   A RE
Sbjct: 418 FVARAEVTPESL--AANPDIRLYPGMPAEVLIVHKSRSAIDYLVAPVSDSFNRAFRE 472