Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 348 a.a., HlyD family secretion protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 60.5 bits (145), Expect = 7e-14
 Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 37/257 (14%)

Query: 70  GIVAQMSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTF 129
           G+V Q  V +   V  G +LA+LD ++  + V +SEA+  +  A  A L+A++       
Sbjct: 51  GLVVQSEVQDNQYVTAGTLLAKLDDSEFRARVLQSEARLASVGAELATLEAKLL------ 104

Query: 130 PESLRDSPDLIDAETALYQTRRRGLEQTLAGIQDSLQLVRSELKITENLAKMGASSRVEV 189
                        + +L    + G++ T A +    + V+ +L     L +   SS+ +V
Sbjct: 105 ------------LQASLIAQAKAGVQATEADV----RRVQQQLTRASELRRRDYSSQDDV 148

Query: 190 IRLNRQRSELELKANEARSDYLVR---------AREELAKASAEADALSEVIRGRSDSLT 240
            RL  +    E +  E+R+    R          RE+L  A AEA+A  E+ + +   L 
Sbjct: 149 DRLTAEFDGAEARLAESRASLAAREQELGVLKAQREQLFAARAEANAGLELAQLQ---LK 205

Query: 241 RLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQAA 300
              +R+P  GIV       +G  VQPG  +  +VP D  + I        I  + P Q  
Sbjct: 206 DTEIRAPFNGIVGK-RGAFVGQYVQPGQALFSLVP-DGTVWITANFKETQIQAMVPGQPV 263

Query: 301 KVKISAY-DYSVYGGLD 316
            V + A+ D+  +G +D
Sbjct: 264 AVSLDAFPDHDFHGVID 280