Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 390 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 40/309 (12%)

Query: 25  IITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVE 84
           ++ + A+  A    W  W E   + T     I      +     G  V +++V + ++V 
Sbjct: 34  VLVVGAVAAAGVFGWRWWTEGRFLETTDNAYIQGDITAIAPKVSG-YVDEVAVGDNEVVS 92

Query: 85  RGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFPESLRDSPDLIDAET 144
            GQ+L +LD            A YR  +  QAR  AE     L    S+  + DL   +T
Sbjct: 93  AGQLLVRLD-----------SADYR-VQVDQARANAEGKAAELA---SIIANIDL--QQT 135

Query: 145 ALYQTRRRGLEQTLAGIQDSLQLVRSELKITENLAKMGASSRVEVIRLNRQRSELELKAN 204
           A+ Q R       +   Q        +L   ++L   GA+SR     L+  R +    A 
Sbjct: 136 AIAQAR-----GAMDAAQARFDRAAKDLARYQDLVGRGATSRQS---LDSAREQATSGAA 187

Query: 205 EARS--DYLVRAREELAKASAEADALSEVIRGRSD-------SLTRLTLRSPVRGIVKDI 255
           E RS    L  A++ LA  SA+ DA +  +R           +L    +R+P+ G+V + 
Sbjct: 188 ELRSAAAALDGAQKRLAVLSADRDAAAAEVRSAQAQRALAEINLANTEIRAPIAGVVGNR 247

Query: 256 EVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGL 315
            V   G  V PG  +M IVP+ E L I        +  + P Q  KV+I AY    +G  
Sbjct: 248 GVRA-GQYVAPGSALMAIVPL-EGLWIAANFKETQLGAMAPGQTVKVEIDAYS-GRHG-- 302

Query: 316 DGKVVGISP 324
            G+VV  +P
Sbjct: 303 QGRVVSFAP 311