Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 435 a.a., type I secretion membrane fusion protein from Phaeobacter inhibens DSM 17395

 Score =  114 bits (284), Expect = 7e-30
 Identities = 102/411 (24%), Positives = 184/411 (44%), Gaps = 56/411 (13%)

Query: 31  LMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLA 90
           L++     WAA  E++     +G +      QV+Q   GG+V ++ V+EGDLVE   +L 
Sbjct: 23  LLVGGLGQWAATAEISGAVIASGSIKVEQNRQVVQHPYGGVVDEVLVSEGDLVEEDALLL 82

Query: 91  QLDPTKTASSVGESEAKYRAARASQARLQAEVT-GKPLTFPESLRD-------SPDLIDA 142
           +L+P++  +     E +     A ++R  AE    + +TF E L +       + +LI+ 
Sbjct: 83  RLEPSELLAERQIVEGQLAETLARRSRYSAERDEAEEVTFAELLFELSGTHVQTEELING 142

Query: 143 ETALYQTRR---------------------RGLEQTLAGIQDSLQLVRSELKITENLAKM 181
           +  L++ R                       G+E   + +Q+ L L+  EL+  ++L   
Sbjct: 143 QKRLFEARLVNLRARISRLQERVGQIQSQIDGIEAQQSALQEQLVLIGKELENQQSLLSQ 202

Query: 182 GASSRVEVIRLNRQRSELE-----LKANEARSDYLVR--AREELAKASAEADALSEVIRG 234
           G +    V+ L R++S L      L A +A+++  V     E L + SA  +     +R 
Sbjct: 203 GLAQSSRVLSLQREQSRLRGQAGALTAQKAQAEGQVTELGLEILNQTSARREEAITTLRD 262

Query: 235 RS--------------DSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERL 280
                             L+RL +R+P+ G+V D+ V     V++    +M ++P  + L
Sbjct: 263 LQVRELELIERRNVILQRLSRLDVRAPMAGVVYDLNVFARKSVIRAADPLMYLIPQSQPL 322

Query: 281 LIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRV 340
           +I  ++AP DI  ++ +Q   +  S+++      L G V  +S D+  D      YY  V
Sbjct: 323 VISAQVAPSDIDQVYLNQPVSLNFSSFNQRTTPTLFGTVSTVSADSFVDPQTGRSYYV-V 381

Query: 341 FIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKP----LNRA 387
             R  +  + ++  +   +VPGM     I+T  +T   YL++P    LNRA
Sbjct: 382 EARLNKGEI-DRLPEGNVLVPGMPVETFIQTNSRTPFAYLLQPFTDYLNRA 431