Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 467 a.a., putative type I secretion membrane fusion protein from Phaeobacter inhibens DSM 17395

 Score =  143 bits (360), Expect = 1e-38
 Identities = 115/413 (27%), Positives = 189/413 (45%), Gaps = 54/413 (13%)

Query: 32  MLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQ 91
           +    + WA   E+T      G+   +     +Q  EGGIV +++VAEGD+V  G V+A 
Sbjct: 55  LFGGLVFWATKAEMTSAVVAPGQFTVAGDRLSVQHLEGGIVREINVAEGDMVAEGDVIAV 114

Query: 92  LDPTKTASSVGESEAKYRAARASQARLQAEVTGK-----PLTFPESLRDSPDLID----- 141
           LD  +  +S     ++  +  A QARLQAE+        P    + + + P L+      
Sbjct: 115 LDGRRMRASRAILTSQMASLLAQQARLQAELAEADQIEVPAELDQLIAEDPQLVSLFEVQ 174

Query: 142 -----AETALYQ--------------TRRRGLEQTLAGIQDSLQLVRSELKITENLAKMG 182
                +  ALY+               +  G +  +  I+D L L++ E+     L + G
Sbjct: 175 RDVFTSNRALYEGQVQILRDRISQLGKQLNGRQARITAIEDQLTLIKGEVADLHKLYEKG 234

Query: 183 ASSRVEVI--------------RLNRQRSELELKANEARSDYLVRAREELAKASAEADAL 228
              +  +                L      L+ +  E     L   R+ + + S+E   +
Sbjct: 235 LVPKTRLSDRQLQHTGLMGTFGALESDSENLQERIAETEERILQVHRDTVNRISSETQLV 294

Query: 229 SEVI---RGRSDS----LTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLL 281
            E I   R R D+    L R T+ +P  G V ++ +NTLG V+ PG  V+++VP    L+
Sbjct: 295 QERILDLRQRLDAAEDVLERQTILAPRAGRVVELSINTLGQVLNPGQNVLELVPSGSDLI 354

Query: 282 IETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRVF 341
           +ETR++P DI  +     A+V+++AY +     + G+VV ++ D++ D +   I YYRV 
Sbjct: 355 VETRVSPTDIDEVVTGGQARVQLTAYSFRSTPPVRGEVVMVAADSIAD-LNSGIPYYRVH 413

Query: 342 IRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRA-KEALRE 393
           IR   + L   A      +PGM A   I TG +T+ DYL+ P+ R+   ALRE
Sbjct: 414 IRIPPEEL--AALPNVKTLPGMPAQAMIETGRQTLADYLLSPVLRSMSNALRE 464