Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 438 a.a., putative HlyD family secretion protein from Phaeobacter inhibens DSM 17395

 Score =  134 bits (336), Expect = 7e-36
 Identities = 114/404 (28%), Positives = 180/404 (44%), Gaps = 52/404 (12%)

Query: 31  LMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLA 90
           ++L  F  W+    +      +G++      QV+Q  +GGIV ++ V EGD V  G VL 
Sbjct: 26  ILLGGFGTWSVATSIAGAVVASGRIEVDRNRQVVQHLDGGIVQEILVEEGDTVAEGAVLL 85

Query: 91  QLDPTKTASSVGESEAKYRAARASQARLQAEV-TGKPLTFPESLRDSP-------DLIDA 142
           +LD  +  S +  +E +     A +ARL AE  + + + F   L D         DL+  
Sbjct: 86  RLDAKELRSQLVITEGQLFELMARRARLDAERDSAETVEFDTELHDLSETRPEVADLMQG 145

Query: 143 ETALYQTRRRG-------LEQTLAGIQDS--------------LQLVRSELKITENLAKM 181
           +  L++ R+         LE+    IQD               L L+  EL   ++L   
Sbjct: 146 QVRLFEARKDSVAREIDQLEKRRTQIQDQIIGVRAQQASRRTQLDLIEEELTNQQSLLDR 205

Query: 182 GASSRVEVIRLNRQRSEL-----ELKANEARSDYLV------------RAREE----LAK 220
           G +    V+ L R  ++L     EL A EA+++  +            + REE    L  
Sbjct: 206 GLAQAGTVLNLRRTEADLQGSLGELIATEAQAEGRITEIDIEILKLGTQQREEAITRLRD 265

Query: 221 ASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERL 280
              +   L+E  R   D L RL + +PV GIV  ++V+T   V++    V+ +VP D  L
Sbjct: 266 LRYQELELAETRRALKDRLARLDITAPVSGIVYGLQVHTPRSVIRAADPVLYLVPQDRPL 325

Query: 281 LIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRV 340
           +I  ++AP D+  I   QA  ++  A D      L G V  IS D  +D+   ++ YYR 
Sbjct: 326 VIAAQVAPTDVDQIFVGQAVTLRFPALDQRSTPELFGSVKQISADAFEDQAS-KLSYYRT 384

Query: 341 FIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPL 384
            I      L+    +   ++PGM     IRT ++T L YL+KPL
Sbjct: 385 EIELNPGQLET-LPEGTVLIPGMPVEGYIRTADRTPLGYLVKPL 427