Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 389 a.a., type I secretion membrane fusion protein, HlyD family from Phaeobacter inhibens DSM 17395

 Score =  249 bits (636), Expect = 1e-70
 Identities = 138/375 (36%), Positives = 219/375 (58%), Gaps = 4/375 (1%)

Query: 22  AGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGD 81
           A RII L A  L  FL WA++  V E+    G+V+ SSR Q++Q+ EGGI+A++ V +GD
Sbjct: 15  ASRIIYLVAGALVVFLLWASFAWVDEIVRADGEVVSSSRSQIVQNLEGGILAELHVHQGD 74

Query: 82  LVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGK-PLTFPESLRD-SPDL 139
           +V+ GQ+LA+L  TK  ++  + + +  A    Q RL+AE+ G      PE L D SP +
Sbjct: 75  VVKAGQILARLQDTKFRAAADDLQDRIDALEIKQYRLEAELEGAFDFNVPEELADRSPGI 134

Query: 140 IDAETALYQTRRRGLEQTLAGIQDSLQLVRSELKITENLAKMGASSRVEVIRLNRQRSEL 199
             +E AL   R+          ++ L  ++ EL   + L K    + +EV R  +  S+ 
Sbjct: 135 YTSERALLNARQTDFTSRRDSAREILDQLKDELANMKRLHKKEIVALIEVNRSQKSVSDA 194

Query: 200 ELKANEARSDYLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNT 259
           + K NE  +   +   E+ +K   E  +  + +R   D L R  + SP+ GIV  + V T
Sbjct: 195 QAKYNEIGTQSELELAEDYSKTLRELTSYRQELRLAQDQLNRTVITSPMAGIVNSLAVTT 254

Query: 260 LGGVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKV 319
           +GGV++PG ++++I+P+ E + +E R+ P +IA + P Q A +K+SAYDY++YG L GKV
Sbjct: 255 IGGVIRPGEEIVEIIPLGEEMFVEARVKPENIASVQPGQDATIKLSAYDYTIYGSLRGKV 314

Query: 320 VGISPDTLQDEVKPEIY-YYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILD 378
             +S DT +DE  P    YYRV ++ ++     +  +   I PGM AT +++TG KTIL+
Sbjct: 315 DFVSADTFEDERNPRAEPYYRVTVKVDRSEFTERQ-QAIEIRPGMRATAELQTGSKTILN 373

Query: 379 YLIKPLNRAKEALRE 393
           Y++KPL +++EALRE
Sbjct: 374 YMLKPLYKSREALRE 388