Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 430 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 43/282 (15%)

Query: 70  GIVAQMSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTF 129
           GI+  M V  GD V+ GQ++A++D  +  +   ++EA  R A++  AR++A       ++
Sbjct: 69  GIIRTMHVKVGDAVKAGQIIAEIDDREQRAQQDQAEATLRKAQSELARVEA-------SY 121

Query: 130 PESLRDSPDLIDAETALYQ------TRRRGLEQTLAGIQDSLQLVRSELKITENLAKMGA 183
           P  +R++   + A  A Y        RRR L +     +++L   + + + T N     A
Sbjct: 122 PLQIREAEAQMAAAQADYDYAALNLKRRRTLVEQDLDARNTLDEAKQQSETTGNTL---A 178

Query: 184 SSRVEVIRLNRQRSELELKANEARSDYLVRAREELAKASAEADALSEVIRGRSDSLTRLT 243
           + +  + RL R+ S L +K           ARE + +A +  +A +         L+   
Sbjct: 179 ARKATLDRLQRE-STLAIKT----------AREAVKEAQSALEATNV-------RLSYSV 220

Query: 244 LRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPM--DERLLIETRIAPRDIAFIHPDQAAK 301
           +R+P+ G+V ++     G  V  G QV  ++ +    RL +   +   D+  I P    +
Sbjct: 221 IRAPLDGVVSEVTAQG-GETVVAGFQVANLITVLDPTRLEMWIYVDETDVGQITPGMTVE 279

Query: 302 VKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRVFIR 343
            ++ +     +GG   ++        Q E++  I YYR  +R
Sbjct: 280 FRVDSLPGRTFGGTVNQIYP------QPEIRDNIVYYRALVR 315