Pairwise Alignments

Query, 299 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

Subject, 311 a.a., chemotaxis protein CheW from Pseudomonas fluorescens FW300-N2E3

 Score =  197 bits (501), Expect = 3e-55
 Identities = 112/287 (39%), Positives = 162/287 (56%), Gaps = 4/287 (1%)

Query: 3   TQNARADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPLTKLPESHPHVKGVATLRGHSLS 62
           TQ    + L +L+F L   +L AIN+ KV E++  P LT +P+ HP V GV  LRG +L 
Sbjct: 12  TQLVGENRLEILMFRLAGRQLFAINVFKVQEVLQLPKLTLMPQRHPFVCGVVNLRGQTLP 71

Query: 63  VIDLSRAIGEQPLVDPQGGCLIVTEISRSRQGLHVQAVSRIVHCLSTDIKPPPYASGTRS 122
           VIDLS+AIG +PLV      +IVTE +RS Q   V  V RIV+     I PPP ++G + 
Sbjct: 72  VIDLSQAIGMRPLVPGPNSTIIVTEYNRSVQAFLVGGVDRIVNMNWEAILPPPTSAGRQH 131

Query: 123 FITGVTRVDNTLVQVLDIEKVIHAIAPPVAEPVHSSLNEEDASLLAAANILVVDDSQVAL 182
           ++T +++VD+ LV+++D+EKV+  I P  A+     L +          +L+VDDS VAL
Sbjct: 132 YLTAISKVDDQLVEIIDVEKVLAEIVPYNAKVSRDKLEDPVLERARGREVLLVDDSNVAL 191

Query: 183 QQSVHTLRNLGIECHTARSAKDAINVLLELQGT----AQEINIIVSDIEMSEMDGYAFTR 238
            Q   TL  LG++ H A     A+N+L     T      ++ +I +D EM EMDGY  T 
Sbjct: 192 SQLRDTLGQLGVKMHIASDGLKALNMLKAWADTGVVMTDKLLMIFTDAEMPEMDGYRLTT 251

Query: 239 TLRETPDFQHLYVLLHTSLDSAMSSEKATQAGANAILTKFSSPELTD 285
            +R  P  + LYV+LHTSL  + +     + G +  L+KF   +L D
Sbjct: 252 EIRNDPRLRGLYVVLHTSLSGSFNDSMVKKVGCDNFLSKFQPDKLVD 298