Pairwise Alignments

Query, 299 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

Subject, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (447), Expect = 5e-49
 Identities = 100/286 (34%), Positives = 164/286 (57%), Gaps = 3/286 (1%)

Query: 10  SLSLLLFTLRSGK-LMAINLLKVSEIIPCPPLTKLPESHPHVKGVATLRGHSLSVIDLSR 68
           S  +L+FTL + + L AI  LKV EI+   P+T++P SH HV G  T+R  ++ VID++ 
Sbjct: 11  SQGMLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAA 70

Query: 69  AIGEQPLV--DPQGGCLIVTEISRSRQGLHVQAVSRIVHCLSTDIKPPPYASGTRSFITG 126
           AIG +P+   + Q   LIVT+  R+     V+ + +I+ C    I+  P  +G   F+TG
Sbjct: 71  AIGFRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTG 130

Query: 127 VTRVDNTLVQVLDIEKVIHAIAPPVAEPVHSSLNEEDASLLAAANILVVDDSQVALQQSV 186
           +TR  N +VQ+LD+E ++  I P         L + +   L   NIL+VDDS +A +Q  
Sbjct: 131 ITRFQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLS 190

Query: 187 HTLRNLGIECHTARSAKDAINVLLELQGTAQEINIIVSDIEMSEMDGYAFTRTLRETPDF 246
             L ++ I  H  ++  +A++++ ++    + I+I+VSDIEM  +DGY     ++  P  
Sbjct: 191 DALDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDIEMPGLDGYELAFEMQNDPQL 250

Query: 247 QHLYVLLHTSLDSAMSSEKATQAGANAILTKFSSPELTDCLVVAAR 292
            H Y +LHTSL S +  ++A Q GA+  L KF++ EL + ++  A+
Sbjct: 251 NHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAMLRGAK 296