Pairwise Alignments

Query, 299 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

Subject, 314 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  202 bits (514), Expect = 8e-57
 Identities = 105/287 (36%), Positives = 169/287 (58%), Gaps = 2/287 (0%)

Query: 8   ADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPLTKLPESHPHVKGVATLRGHSLSVIDLS 67
           + S  LLLF L   +L A+  LK+ E++P   L+ +P+SHP + G AT+RGH++ +ID++
Sbjct: 23  SQSQGLLLFRLSHTQLFALGTLKIRELVPFSKLSAIPQSHPAILGAATVRGHTIPIIDMA 82

Query: 68  RAIGEQPLVDPQ--GGCLIVTEISRSRQGLHVQAVSRIVHCLSTDIKPPPYASGTRSFIT 125
            A+G  P+   +     +I+T+  R   G  V+++ +I+ C   DI+ PP   G  +F+T
Sbjct: 83  AAVGYAPITPEECANAYIIITDCQRMVMGFLVRSIDKIIECNWRDIESPPDNLGKNAFLT 142

Query: 126 GVTRVDNTLVQVLDIEKVIHAIAPPVAEPVHSSLNEEDASLLAAANILVVDDSQVALQQS 185
           GVTRVD+ LVQ+LD+E ++  I P   +   + L +    +L   NIL+VDDS VA +Q 
Sbjct: 143 GVTRVDDKLVQLLDVELLLSKIFPASPDTTRAILTDVQREILKPLNILLVDDSMVARKQL 202

Query: 186 VHTLRNLGIECHTARSAKDAINVLLELQGTAQEINIIVSDIEMSEMDGYAFTRTLRETPD 245
              L ++ I        +DA++++ E     + ++++VSDIEM  +DGY     ++ TP 
Sbjct: 203 SDALDSINIPYLVTSDGRDALSIMEEAAKEGRPVDLLVSDIEMPGLDGYELAFEVKNTPA 262

Query: 246 FQHLYVLLHTSLDSAMSSEKATQAGANAILTKFSSPELTDCLVVAAR 292
               Y++LHTSL S +S  +A Q GAN  LTKF + EL D ++  A+
Sbjct: 263 LADAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELIDAMLRGAK 309