Pairwise Alignments

Query, 299 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

Subject, 164 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.5 bits (132), Expect = 8e-13
 Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 26  INLLKVSEIIPCPPLTKLPESHPHVKGVATLRGHSLSVIDLSRAIGEQPLVDPQGGCLIV 85
           IN+++V E++    +  +P +  +V G+  LRG+ ++VID     G Q         +++
Sbjct: 33  INVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRFGLQSAEVDDSTRIVI 92

Query: 86  TEISRSRQGLHVQAVSRIVHCLSTDIKPPPYASGTRS--FITGVTRVDNTLVQVLDIEKV 143
            E  +   G+ V +V+ +V+   ++I   P      S  FI GV+  DN L+ ++D++K+
Sbjct: 93  IEAEKQVIGILVDSVAEVVYLRRSEIDNAPNVGTEESAKFIQGVSNRDNELLILVDLDKL 152

Query: 144 I 144
           +
Sbjct: 153 L 153