Pairwise Alignments

Query, 299 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

Subject, 178 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 6/126 (4%)

Query: 25  AINLLKVSEIIPCPPLTKLPESHPHVKGVATLRGHSLSVIDLSRAIGEQPLVDPQGGCLI 84
           AI +L V EII    +T++P     + G+  LRG  + VIDLS+ +G    V  +  C++
Sbjct: 30  AIGILDVKEIIEIEGITRVPMMPEFLCGIINLRGKVVPVIDLSKRLGRLTTVISKKSCIV 89

Query: 85  VTEIS----RSRQGLHVQAVSRIVHCLSTDIKPPP-YASGTR-SFITGVTRVDNTLVQVL 138
           + E+S    R   G+ V  V+ I+       +PPP + +  R  FI  + RV    + +L
Sbjct: 90  LVEVSHEDERQTIGMLVDEVNEILEIDDEHTQPPPDFGADLRVDFIRAMGRVGEHFMILL 149

Query: 139 DIEKVI 144
           DI  V+
Sbjct: 150 DINYVL 155