Pairwise Alignments

Query, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 428 a.a., Outer membrane porin, OprD family from Pseudomonas fluorescens FW300-N2E2

 Score =  229 bits (585), Expect = 1e-64
 Identities = 153/436 (35%), Positives = 225/436 (51%), Gaps = 46/436 (10%)

Query: 25  DEDKADGFIEGSSFNLHFRNAYFNRDNHNAGVRDTREWGQGAVARFESGYTPGVVGFGLD 84
           D+ ++ GF+E SS  +  RNAY NRD +  G +D  EWGQ A+  F SG+T G VG G+D
Sbjct: 23  DQAESKGFVEDSSLKVLLRNAYINRD-YKDGNQDKAEWGQAAIGTFSSGFTQGTVGVGVD 81

Query: 85  AHAMLGLKLDGGGGHAGTSILPEHIKDDGELGAAPHSFSTAGAAVKLKAFDTELKAGDLF 144
           A  +  L+LDGG G +G   +       G+ G A    S  GAAVK +  +T L  GD  
Sbjct: 82  AFGLYALRLDGGKGRSGAGGI--DFFKQGDSGNAADDLSKFGAAVKFRVSNTVLAYGDQM 139

Query: 145 LTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQSGHRRIDTYYGSLD 204
              PV++   +R+LP+++ G  +T+  I GL L  G+  FT    +S   R         
Sbjct: 140 PALPVLSYDNSRLLPESYTGTLITSKEIKGLELNAGR--FTAESRKSAEGR--------- 188

Query: 205 EHDKSKHLNWAGASWSGTEHITANLYAAELKDIWNQYYADFDYTYVVNDLVSLNPGVHFY 264
           +    K +N  G S+  TE   A+LYA++++D+  + Y + +Y + +    SL    + Y
Sbjct: 189 DSGGLKSINVLGGSYQFTEQFKASLYASDVEDVLKKQYVNANYVFPLAKDQSLTLDFNGY 248

Query: 265 HTQ-DTGQALLGKI---DNNTYSVHFTVNAGFHSVTAAYQRVNGNTPFDYI--------- 311
            T+ D        +   DN  +S+  T   G HS T A+QR  G++   Y          
Sbjct: 249 RTKLDNSYVRENNVTGDDNKIWSLAATFATGPHSFTLAHQRSTGDSNLGYAYGGYQREQN 308

Query: 312 ---NLGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRGEADLTKA 368
              + G+++YL NS  +SDFNA +ERSW+L YG DF   GVPGL+ +++Y RG+   T  
Sbjct: 309 RVGDGGNTIYLANS-YWSDFNAEDERSWQLGYGLDFTTFGVPGLTYNVAYVRGDNITTST 367

Query: 369 TQDTTHYDYYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGSQGYASIDSNS 428
           ++  T  + + +              KYV Q G  KDLSV +R +  R SQ   S + N 
Sbjct: 368 SEGGTEREIFNQ-------------FKYVVQSGPAKDLSVRLRSSVLRVSQ--KSSEYNV 412

Query: 429 DNDELRVIVDYPLNVF 444
             +ELRV VDYP+NVF
Sbjct: 413 SGNELRVFVDYPINVF 428