Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 491 a.a., diguanylate cyclase from Pseudomonas fluorescens FW300-N2E3

 Score =  239 bits (611), Expect = 1e-67
 Identities = 153/417 (36%), Positives = 232/417 (55%), Gaps = 47/417 (11%)

Query: 107 RKRGDVLWLDKQGNIVGDSTSSVPRKANFGETGVFKAHQHNANLGLLVGPPFKAKLGDLD 166
           ++   V   D QG+ +  +   V   ++  +   FK H+ N++ G+ +GP   ++   + 
Sbjct: 78  KQLNSVALYDAQGDWIFSTNKHVSPNSSHADRAFFKHHRDNSDRGIFIGPAILSRATGV- 136

Query: 167 WCISFSRRISGPNGEFAGLAAGALRLSYFNELFQRLDIGHDSSINLFNTDGQLLVRQPYR 226
           W IS SRRI  P+G FAG+ A  L L +F +L++ + +G   +I+L +++G+LLVR P++
Sbjct: 137 WVISVSRRIDHPDGSFAGVIAATLSLEHFLKLYRTMSVGQYGAISLTSSEGRLLVRYPFQ 196

Query: 227 GQDPLIGTYYTERPNFKRILSEQS-GSFTARSHSSGKLRMFTFARVAQLPLIVLVAHSAD 285
            QD  IG   +  P F   L + S G+    S+  G  R++ F R  Q PL+  VA   D
Sbjct: 197 EQD--IGRDLSRAPIFSEYLRKMSSGTVDFVSNVDGIHRIYAFTRSDQYPLVTTVAVGQD 254

Query: 286 EVFESW----RRTAILVSVATGGLCVGILWLTLLLGREL------RRRHEAE-------- 327
           E  ++W    R++  +V V  G        L + LGR L      R R EA+        
Sbjct: 255 EAMQAWWSQTRQSVAVVMVLLG--------LLITLGRRLIADISHRIRAEADLRTTQTTL 306

Query: 328 ----EDLAMLASTDSLTGLANRRRLDHVLRQEWARAQRSRKPLAILMVDVDHFKAFNQRH 383
               + L +LAS D LTGLANRR  D  L  E+ RA+R R PL+++++DVD FK +N  +
Sbjct: 307 IELNQTLEVLASEDKLTGLANRRHFDQFLDIEFKRAKRQRSPLSLILIDVDFFKRYNDHY 366

Query: 384 GHAGGDHALREVAKAIEACIRRPADLAARYGGEEFQVVLPETDLAGAQLLAERI-----R 438
           GH  GD  LR ++++I+ C+RRPAD+ ARYGGEE  VV+P TD +GA+ +AE I     +
Sbjct: 367 GHLAGDECLRIISQSIKQCVRRPADMTARYGGEEIAVVMPNTDESGARSVAEAILLGIAQ 426

Query: 439 ANVEAL-APFADDAHAVTVSIGIG---LSGTQQDLGRLLGAADEALYRAKANGRNRV 491
           A +E L +PF     +VT S+G+       ++ D   L+  AD ALY AK+ GRNR+
Sbjct: 427 ARLEHLSSPFG----SVTASLGLATFTAYDSEHDETSLIDLADRALYLAKSQGRNRL 479