Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 516 a.a., diguanylate cyclase from Pseudomonas fluorescens FW300-N2E3

 Score =  218 bits (556), Expect = 3e-61
 Identities = 138/395 (34%), Positives = 218/395 (55%), Gaps = 23/395 (5%)

Query: 116 DKQGNIVGDSTSSVPRKANFGETGVFKAHQHNANLGLLVGPPFKAKLGDLDWCISFSRRI 175
           D+QG  + +S   +P  AN  +   F  H+ + +LG  +GP  +++  + +W ++ SRRI
Sbjct: 120 DEQGRWLLNSNGVIPAGANNSDRDYFIYHRDHTDLGPYLGPSIRSRSTN-EWIMTVSRRI 178

Query: 176 SGPNGEFAGLAAGALRLSYFNELFQRLDIGHDSSINLFNTDGQLLVRQPYRGQDPLIGTY 235
           + P+G FAG+A   + L+YF  L++ +D G +  INL  + G ++VR+P+R QD  IG  
Sbjct: 179 NHPDGSFAGVALATIYLNYFLNLYEGVDTGTNGLINLVTSSGNIVVRKPFRDQD--IGIN 236

Query: 236 YTERPNFKRILSE-QSGSFTARSHSSGKLRMFTFARVAQLPLIVLVAHSADEVFESWRRT 294
            ++   F  +  +  SG+ T +S   G  R+  F R+   PL+V+     +EV   WR  
Sbjct: 237 ISKGEVFALLKPDVNSGTATIKSFIDGVERVIGFRRINGYPLVVVAEFDRNEVLADWRSE 296

Query: 295 AILVSVATGGLCVGILW----LTLLLGRELRRRHE----------AEEDLAMLASTDSLT 340
           ++   + +  L + + +    L  L+G++++ + E          A + L ++A  D LT
Sbjct: 297 SLASLIISSILLIILSFIGYRLIKLMGQQIQAQRELQASQKDYIEANKILGLMALEDGLT 356

Query: 341 GLANRRRLDHVLRQEWARAQRSRKP-LAILMVDVDHFKAFNQRHGHAGGDHALREVAKAI 399
            LANRR  D  +  E AR +R +    A++M+DVD FK++N  +GH  GD  L+ V   I
Sbjct: 357 RLANRRHFDFFIEAEVARKKRKKLDGTALIMIDVDLFKSYNDLYGHVQGDECLKAVGAII 416

Query: 400 EACIRRPADLAARYGGEEFQVVLPETDLAGAQLLAERIRANVEALAPFADDAHAVTVSIG 459
              + R  DLAARYGGEEF VVL  TD  GA LLAE+IR ++E       D+    V+I 
Sbjct: 417 RKHVNRTGDLAARYGGEEFAVVLSNTDYVGAFLLAEKIRLDLEHAKIQHSDSPLGVVTIS 476

Query: 460 IGLSGTQQ----DLGRLLGAADEALYRAKANGRNR 490
           IG+S   +     +  L+  AD+ALY AK++GRNR
Sbjct: 477 IGISSLSEREVDTVESLVDIADKALYIAKSSGRNR 511