Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 523 a.a., diguanylate cyclase from Pseudomonas fluorescens FW300-N2E3

 Score =  214 bits (546), Expect = 5e-60
 Identities = 137/391 (35%), Positives = 211/391 (53%), Gaps = 23/391 (5%)

Query: 116 DKQGNIVGDSTSSVPRKANFGETGVFKAHQHNANLGLLVGPPFKAKLGDLDWCISFSRRI 175
           DK G  V  S   +PR+    +   FK HQ N  L   +GP  +++    +W I  SRRI
Sbjct: 122 DKNGQWVVTSFDDLPRRGGVADRDYFKFHQQNPTLLAHIGPAIRSRQNG-EWIIPISRRI 180

Query: 176 SGPNGEFAGLAAGALRLSYFNELFQRLDIGHDSSINLFNTDGQLLVRQPYRGQDPLIGTY 235
           + P+GEF G+    ++LSYF++ F+   I  +  + L  +DG LL R+P+  ++  IG  
Sbjct: 181 NDPHGEFQGVLLAGIKLSYFDQFFKSFSIDDNGVMFLALSDGTLLARRPF--EEARIGES 238

Query: 236 YTERPNFKRILSEQS-GSFTARSHSSGKLRMFTFARVAQLPLIVLVAHSADEVFESWRRT 294
                 F++ L   S G+   RS     +R++ + ++   PL+V  A   + +   W   
Sbjct: 239 LAHGDIFQKYLPHASFGNGMIRSVVDNVIRLYGYRQLDAYPLVVAAATPKETILRGWYAN 298

Query: 295 AILVSVATGGLCVGIL---WLTLLLGR-------ELRRRHEAEEDLAMLASTDSLTGLAN 344
           A   SV    + +G+    W+ +L  R       +LR    A+E L ++A+ DSLTGLAN
Sbjct: 299 AYQSSVVVALVVLGVGLFGWVFVLQVRNGELIEADLRT---AQEQLEVIATHDSLTGLAN 355

Query: 345 RRRLDHVLRQEWARAQRSRKPLAILMVDVDHFKAFNQRHGHAGGDHALREVAKAIEACIR 404
           RR  +  L  E+AR  R +  L+++M+D+D FK +N  +GH  GD  L EVA+A+ +C  
Sbjct: 356 RRLFERALDIEFARGARQQSSLSLIMLDIDFFKRYNDAYGHVAGDQCLAEVARAVNSCCL 415

Query: 405 RPADLAARYGGEEFQVVLPETDLAGAQLLAERIRANVE---ALAPFADDAHAVTVSIG-- 459
           R +DLA RYGGEEF V+LP+TD+ GA  +AE+IR +++    +   A   H +TVS+G  
Sbjct: 416 RKSDLAVRYGGEEFAVLLPDTDIHGAFTIAEQIRHSLKDKHIIHSGAPSGH-LTVSLGCY 474

Query: 460 IGLSGTQQDLGRLLGAADEALYRAKANGRNR 490
             +      +   +  AD ALY+AK  GRNR
Sbjct: 475 AFVPKDGDSIEMFIERADAALYQAKNLGRNR 505