Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 501 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Xanthomonas campestris pv. campestris strain 8004

 Score =  188 bits (478), Expect = 3e-52
 Identities = 144/475 (30%), Positives = 235/475 (49%), Gaps = 48/475 (10%)

Query: 34  VSYLLARERDSVEQSAVRSSNNIVQLIESDILRNVELYDQSLQGLIWAVGRKELPEVPGP 93
           +++ + +  D   + A   S ++V+ IE D   N+   D++   L++    + LP++ G 
Sbjct: 52  LAHSVGQHADDAIKDADILSMSVVERIEGDGFENI---DRNRLHLLFQRQVRSLPQLHG- 107

Query: 94  IRQRLLFNEAFVDRKRGDVLWLDKQGNIVGDSTSSVPRKANFGETGVFKAHQHNANLGLL 153
                             +   D++GN +      VP  AN  +   F  H+ +A   + 
Sbjct: 108 ------------------IFVYDEKGNWIVTDKDKVPASANNADREYFHYHKAHAGERVH 149

Query: 154 VGPPFKAK-LGDLDWCISFSRRISGPNGEFAGLAAGALRLSYFNELFQRLDIGHDSSINL 212
           VGP   ++  G+L   I  SRRI+  +G F G+    LR+ YF+  +    +     I L
Sbjct: 150 VGPVITSRSTGEL--VIPVSRRINNKDGNFGGVFLVTLRVQYFSRFYADFRMDEQGVIVL 207

Query: 213 FNTDGQLLVRQPYRGQDPLIGTYYTERPNFKRILSEQSGSFTARSHSSGKL-RMFTFARV 271
            + +G ++VR P+     +IG    +   F + L   S         + K+ RM+ + R+
Sbjct: 208 ADQNGTIMVRHPF--DTNMIGRNIAKGDIFSKYLPHASRGVHMVVAITDKVERMYGYERL 265

Query: 272 AQLPLIVLVAHSADEVFESWRRTA----ILVSVATGGLCVGILWLTLLLGRELRRRHEAE 327
            + PL+VL   S   +  SW  +     I++ +    L + +L+ TL+  R+++   + E
Sbjct: 266 NRYPLVVLAGKSKRAILGSWYESLYGSLIMLCLI---LPIPVLFATLI-SRQIKTTLKVE 321

Query: 328 EDLAM-------LASTDSLTGLANRRRLDHVLRQEWARAQRSRKPLAILMVDVDHFKAFN 380
           ++L +       +A  DSLTGLANRR+LD VL  E  RA+R+ +PL ++MVD+D+FK +N
Sbjct: 322 DELRLAYAAVEAIAMQDSLTGLANRRQLDVVLPAEIKRAKRTSQPLGVIMVDIDYFKRYN 381

Query: 381 QRHGHAGGDHALREVAKAIEACIRRPADLAARYGGEEFQVVLPETDLAGAQLLAERIRAN 440
             +GH  GD  ++ +A  ++   RR  +LAARYGGEE  V+LP  D A     AERI  +
Sbjct: 382 DYYGHPAGDLCIKAIANVLKNHTRRAGNLAARYGGEELTVLLPSCDQAAVLAAAERIVES 441

Query: 441 VEALAPFADDAHA--VTVSIG---IGLSGTQQDLGRLLGAADEALYRAKANGRNR 490
           +  L    DD+    +TVS+G         + D   LL  AD+ALY AK  GRNR
Sbjct: 442 IRGLQIAHDDSPEGYLTVSVGAYSYSAFNKEVDASGLLKCADDALYAAKQAGRNR 496