Pairwise Alignments

Query, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 578 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (354), Expect = 9e-38
 Identities = 75/165 (45%), Positives = 105/165 (63%), Gaps = 5/165 (3%)

Query: 333 LASTDSLTGLANRRRLDHVLRQEWARAQRSRKPLAILMVDVDHFKAFNQRHGHAGGDHAL 392
           +A TD LTG  NRR LD  +++E   A     PL+I+M D+D+FK FN R+GH  GD  L
Sbjct: 404 MAETDGLTGCYNRRYLDSQIQKELIYANDHNMPLSIVMFDIDNFKQFNDRYGHVLGDQCL 463

Query: 393 REVAKAIEACIRRPADLAARYGGEEFQVVLPETDLAGAQLLAERIRANVEAL-APFADDA 451
           +++  A ++ ++RP D+ ARYGGEEF ++LP + L  A  +AER+R  + AL  P  D +
Sbjct: 464 KQIVNAAKSILQRPTDILARYGGEEFMLLLPSSHLEDAYKIAERLRKAIIALHIPHEDSS 523

Query: 452 HAVTVSIGIGLSGTQQ----DLGRLLGAADEALYRAKANGRNRVE 492
           H+  V+I +G++  Q     D  RLL  ADEALY+AK  GRNR E
Sbjct: 524 HSGLVTISLGVACWQPSQLIDTNRLLCQADEALYQAKQQGRNRTE 568