Pairwise Alignments

Query, 580 a.a., fructose PTS permease - IIBC component from Pseudomonas putida KT2440

Subject, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

 Score =  216 bits (550), Expect = 2e-60
 Identities = 131/341 (38%), Positives = 195/341 (57%), Gaps = 14/341 (4%)

Query: 242 HLLTGVSFMLPMVVAGGLLIALSFVFGIEAYKEAGTLPAALMQIGGEAAFKLMVPLLAGY 301
           HLL G S MLP +VAGG+L+AL+ +   +    A  L A +  IG +      + +L G+
Sbjct: 25  HLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADGLLADISNIGIKGLVLFPI-ILGGF 83

Query: 302 IAWSIADRPGLAPGMIGGLLASTLGAGFIGGIVAGFLAG---YSAKAIARWARLPSSLEA 358
           I +SIAD+P LAP MI   + + +G GF+G IVAGF+AG   +  K I     L +++ A
Sbjct: 84  IGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFIAGGVVFQLKKIP----LSANMTA 139

Query: 359 LKPILIIPLLASLFTGLVMIYVVGQPVAAMLEGLTHFLDSMGTTNAILLGLLLGGMMCVD 418
           L    I PL+ +L +  ++++ +G+P+   +  +  FL SM   + ++LG +LGGM   D
Sbjct: 140 LGAYFIYPLIGTLISAGIVLWGIGEPIKLFMASMNEFLASMAGASKVVLGAILGGMTAFD 199

Query: 419 LGGPINKAAYAFSVGLLASSSYAPMAATMAAGMVPPIGLGIATFLARRKFAQSEREAGKA 478
           +GGPINK A  F+   + +  +  M     A   PP+G+ +ATFL ++KF + E+EAGKA
Sbjct: 200 MGGPINKVATLFAQTQVDTQPWL-MGGVGIAICTPPLGMALATFLFKKKFTKQEQEAGKA 258

Query: 479 ALALGLCFISEGAIPFAAKDPLRVIPASIAGGALTGALSMYFGCKLMAPHGGLFVLLIPN 538
           A  +G   ISEGAIPFAA DP+RV+P+ +AGG +           L AP GGL    + +
Sbjct: 259 AAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLTNVLLHAPWGGLITAPVSS 318

Query: 539 AINHALLYLLAIVAGSLVTAVVYAVIK--KSERVELAVAPA 577
            I    +Y++ I  GSL TA++    K    E VE  +A A
Sbjct: 319 NIP---MYVVGIALGSLTTALIVGFWKPVAEEEVEDEIAEA 356



 Score = 84.7 bits (208), Expect = 7e-21
 Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 3/106 (2%)

Query: 104 AAVTGAPAAASSAGAR--IVAVTACPTGVAHTFMAAEALQQAAQQLGYQLTVETQGSVGA 161
           AA T A AA ++      IVAVT CP+GVAHTFMAA+AL++A    G ++ VETQG  G 
Sbjct: 356 AAPTQAQAAPAAGEGEYDIVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVETQGQNGI 415

Query: 162 RNPLSAEAIAAADVVLLAADIEVPTA-RFAGKRIYRCGTGIALKQA 206
           +N ++   +A A +V+LA DI+V  A RFA  ++  C T  A+K+A
Sbjct: 416 KNRITDLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKA 461



 Score = 35.8 bits (81), Expect = 4e-06
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 2   NIAIVTACPNGQVSSVLSARLLSAAAQRRGWSTSVEVQNTEHPERQLSAAQIAEADWVLV 61
           +I  VT CP+G   + ++A+ L  A    G    VE Q     + +++   +A A  V++
Sbjct: 373 DIVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVETQGQNGIKNRITDLDVANAKLVIL 432

Query: 62  VSTGPV-DLARFVGKRLYQSTPSQAL 86
                V D  RF   ++ + +  +A+
Sbjct: 433 AHDIQVKDAHRFANAKVIECSTKEAM 458