Pairwise Alignments

Query, 580 a.a., fructose PTS permease - IIBC component from Pseudomonas putida KT2440

Subject, 575 a.a., PTS fructose IIC component (NCBI) from Rhodospirillum rubrum S1H

 Score =  547 bits (1409), Expect = e-160
 Identities = 298/559 (53%), Positives = 383/559 (68%), Gaps = 13/559 (2%)

Query: 16  SVLSARLLSAAAQRRGWSTSVEVQNTEHPERQLSAAQIAEADWVLVVSTGPVDLARFVGK 75
           ++L A  L  AA   G    +EV++ +     LS   I  A  V+++ TG +D+ RF G 
Sbjct: 17  ALLVAEALRRAASGAGHRIDIEVRSDQGVVNALSDDAIVRARAVILIGTGDLDVGRFPGL 76

Query: 76  RLYQSTPSQALADREGFLDEAAANAELLAAVTGAPAAASSAGARIVAVTACPTGVAHTFM 135
              ++T    LAD    L  A       A + G+ AA      RIVA+T+CPTG+AHTFM
Sbjct: 77  PKLETTIEAVLADVGAVLGRAEG-----AELAGSVAATDDGVRRIVAITSCPTGIAHTFM 131

Query: 136 AAEALQQAAQQLGYQLTVETQGSVGARNPLSAEAIAAADVVLLAADIEVPTARFAGKRIY 195
           AAE + QAA+ LGYQ  VETQGSVG+R+ LS + IA AD+VL+AAD ++  ARF GKR++
Sbjct: 132 AAEGITQAAKALGYQARVETQGSVGSRDTLSDDEIAQADIVLIAADTQIDLARFDGKRVF 191

Query: 196 RCGTGIALKQARATLDKALAQATVENGADAAAATTPT-----KSEKTGVYKHLLTGVSFM 250
             GT  A+   +A + +ALA+AT++ G  +   T         +++TG YKHL+TGVSFM
Sbjct: 192 LSGTKPAIADGKALIARALAEATLQGGKKSLVDTVEAGKAQRSAQRTGAYKHLMTGVSFM 251

Query: 251 LPMVVAGGLLIALSFVFG-IEAYKEA--GTLPAALMQIGGEAAFKLMVPLLAGYIAWSIA 307
           LP VVAGGLLIAL+F  G I A+ EA  GTL   L QIG ++AF LMVP LAGYIA+SIA
Sbjct: 252 LPFVVAGGLLIALAFALGGINAFDEANKGTLAYDLFQIGAKSAFVLMVPALAGYIAFSIA 311

Query: 308 DRPGLAPGMIGGLLASTLGAGFIGGIVAGFLAGYSAKAIARWARLPSSLEALKPILIIPL 367
           DRPG+APGMIGGL+A+ LGAGF+GGI+AGF+AGY      R  RL  +LE LKP+LI+P+
Sbjct: 312 DRPGIAPGMIGGLVAANLGAGFLGGIIAGFIAGYVTAWFNRTIRLHRNLEGLKPVLILPV 371

Query: 368 LASLFTGLVMIYVVGQPVAAMLEGLTHFLDSMGTTNAILLGLLLGGMMCVDLGGPINKAA 427
           L ++ TGL+MIYVVG PVA +L  LT  L  M  ++AI+LGLL+G MM  D+GGP+NKAA
Sbjct: 372 LGTVVTGLLMIYVVGTPVAGLLSWLTEALRGMQGSSAIVLGLLIGAMMAFDMGGPVNKAA 431

Query: 428 YAFSVGLLASSSYAPMAATMAAGMVPPIGLGIATFLARRKFAQSEREAGKAALALGLCFI 487
           YAFS GLLAS  Y PMAA M AGM P +G+ +A+ L R +F  SEREAG AA  LGL FI
Sbjct: 432 YAFSTGLLASEVYTPMAAAMVAGMTPALGVALASRLFRSRFTASEREAGGAAAVLGLAFI 491

Query: 488 SEGAIPFAAKDPLRVIPASIAGGALTGALSMYFGCKLMAPHGGLFVLLIPNAINHALLYL 547
           +EGAIPFAA DP RVIPA +AG A  GA+SM  G +L  PHGG+FVL IPNA+ H L Y+
Sbjct: 492 TEGAIPFAASDPFRVIPALMAGSAAAGAISMTVGAELKVPHGGIFVLPIPNAVTHLLGYI 551

Query: 548 LAIVAGSLVTAVVYAVIKK 566
           +A+V G+L+TA+V  + K+
Sbjct: 552 VALVVGTLITALVLRITKR 570



 Score = 65.5 bits (158), Expect = 6e-15
 Identities = 36/100 (36%), Positives = 56/100 (56%)

Query: 3   IAIVTACPNGQVSSVLSARLLSAAAQRRGWSTSVEVQNTEHPERQLSAAQIAEADWVLVV 62
           I  +T+CP G   + ++A  ++ AA+  G+   VE Q +      LS  +IA+AD VL+ 
Sbjct: 116 IVAITSCPTGIAHTFMAAEGITQAAKALGYQARVETQGSVGSRDTLSDDEIAQADIVLIA 175

Query: 63  STGPVDLARFVGKRLYQSTPSQALADREGFLDEAAANAEL 102
           +   +DLARF GKR++ S    A+AD +  +  A A A L
Sbjct: 176 ADTQIDLARFDGKRVFLSGTKPAIADGKALIARALAEATL 215