Pairwise Alignments

Query, 950 a.a., Phosphotransferase system, fructose-specific EI/HPr/EIIA components from Pseudomonas putida KT2440

Subject, 400 a.a., bifunctional PTS fructose transporter subunit IIA/HPr protein from Vibrio cholerae E7946 ATCC 55056

 Score =  261 bits (666), Expect = 8e-74
 Identities = 157/399 (39%), Positives = 217/399 (54%), Gaps = 28/399 (7%)

Query: 1   MLELANEQIAMGQKAADKAEALRLLADRLVADGLVAEGYLQGLQAREAQGSTFLGQGIAI 60
           MLEL  + I + Q  A+K  A++ LA  L A GLVAEGY QG+  REAQ ST+LG GIAI
Sbjct: 1   MLELTTQDIQLQQHFANKQAAIQGLAHALTAKGLVAEGYAQGMLNREAQHSTYLGNGIAI 60

Query: 61  PHGTPQTRDLVYATGVRLLQFPEGVDWGDGQMVYLAIGIAARSDEHLRLLQLLTRALGET 120
           PHGT  TR+LV  TGV  + FP+G+DWGDG +VY+AIGIAA+SDEHL +L+ LTR L   
Sbjct: 61  PHGTTDTRELVKQTGVTAMHFPQGLDWGDGNLVYVAIGIAAKSDEHLGILKQLTRVLSAD 120

Query: 121 DLAEALRRASSAEALLKLLQGAPQALA-LDAQLVGLNVPAEDFDELAWRGARLLQRADCV 179
            + +AL++A +A+ ++ +++G  Q  A  DA L+ L  PA D  +++     LL+   C 
Sbjct: 121 GVEQALQQAKTAQQIIAIIKGEAQLTADFDASLIQLQFPASDMVQMSAVAGGLLKNTGCA 180

Query: 180 DSGFAAVLQQAEPLPLGEGLWWLHSERQVRQPGLAFITPQQPLRYRDQPLNGLFCLASLG 239
           ++ F A L    P  LG GLW + S+R V++ G++ +T      Y  Q +  L   +   
Sbjct: 181 ENEFVADLVTKAPTHLGRGLWLVASDRAVKRTGMSIVTTANHCEYEQQAVKALIAFSVCN 240

Query: 240 AAHEALLERLCEVLIEGRGQVLYQA----------------TSSRAVL------EVLGGE 277
             H+ LL  + + + E +   L QA                 + R +       E +  E
Sbjct: 241 DVHQPLLNTITQCVFEQKQDQLLQADVQQLLNLFSGNAEQTIAQRTIAVGTITEETIAAE 300

Query: 278 VPADWPSARVVLA-----NPHGLHARPAKVLAQLAKGFEGEIRVRLVDSAQPAVSVKSLS 332
             A+  SAR   A     N HGLHARP  +L   AK FE  IRV  +D     V+ KSL 
Sbjct: 301 TVAEPDSARAHTATFRIKNSHGLHARPGAMLVAEAKKFESNIRVSNLDGDGQVVNAKSLM 360

Query: 333 KLLSLGARRGQALELVAEPSIAADALPVLLAAIEQGLGE 371
           K+++LG +    L+  AE   A  AL  L  AI  GLGE
Sbjct: 361 KVIALGVKHNHQLQFTAEGPDAEAALQALGVAINAGLGE 399