Pairwise Alignments

Query, 331 a.a., catabolite repressor-activator, DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

 Score =  280 bits (716), Expect = 3e-80
 Identities = 159/327 (48%), Positives = 215/327 (65%), Gaps = 2/327 (0%)

Query: 1   MKLSDIARLAGVSVTTASYVINGKAEQQRISNSTVERVRAVVEAHGFTPNPQAAGLRSRH 60
           M L +IA+LAGVS TTASYVINGKA++ RIS  T  +V AVVE + F P+  A+ LR+ +
Sbjct: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60

Query: 61  TRTLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDA 120
           +R+ G I+PDLEN SYAR+AK LEQ +R  GYQ+LIA SDD P  E    +   +RR DA
Sbjct: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120

Query: 121 LFVASCLPPEDDSYRELQDKGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSAPR 180
           LFVAS +P   + Y +LQ  G PVIAIDR LD  +F  VIS+D  A+ +L  S+L+    
Sbjct: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180

Query: 181 SIALIGARPELSVSQARAGGFDEALQGYTGEVRRYQGEAFSRECGQRLMQQLIDDLGGLP 240
           S+ L+GA PEL+VS+ R  GF  A++          GE F+RE G+++  + + +   LP
Sbjct: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVAN-DQLP 239

Query: 241 DALVTTSYVLLQGVFDTLQARPVDSRQLQLGTFGDNQLLDFLPLPVNAMAQQHGQIAATA 300
           DA+V TSY LL+G+ D L  +P   ++++L TFGDN+LLDFLP+ VN++ QQ   IA +A
Sbjct: 240 DAVVATSYTLLEGILDVLLEQPELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADSA 299

Query: 301 LELALAAIEEKRYEPGVHAVGRTFKQR 327
           L LAL A   KRY+ G+  + R  K R
Sbjct: 300 LALALNA-SAKRYQTGIELIPRQLKVR 325