Pairwise Alignments

Query, 331 a.a., catabolite repressor-activator, DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 28/342 (8%)

Query: 3   LSDIARLAGVSVTTASYVINGKAEQQRISNSTVERVRAVVEAHGFTPNPQAAGLRSRHTR 62
           + D+AR AGVSV T S VIN   +  + S ++++ V + +   G+ PN  A  L ++ T 
Sbjct: 4   IKDVAREAGVSVATVSRVIN---KSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60

Query: 63  TLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALF 122
           T+G ++ D+ +P +  + K ++  A   G  LLI +   + + ER+  +L    RCDAL 
Sbjct: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120

Query: 123 VASCLPPEDDSYRELQDKGLPVIAIDRRLDPAHFCSVISDDRDASRQLAAS-LLSSAPRS 181
           + S   P ++   E  ++   ++ I+R + P      IS D      LA   L+    R+
Sbjct: 121 IHSKALPNEELI-EYANEVKTLVLINRHI-PQLADRCISLDNQKGAYLATDFLIRQGHRN 178

Query: 182 IALIGARPELSVSQARAGGFDEAL--QGYTGEVRRYQGEAFSRECGQRLMQQLIDDLGGL 239
           IA I +  ++  +  R  G+ +AL   G T      +  +   E G++ M  L+  +  L
Sbjct: 179 IACISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLL--VKSL 236

Query: 240 P-DALVTTSYVLLQGVFDTLQ--ARPVDSRQLQLGTFGDNQLLDFL-------PLPVNAM 289
           P  A+V  +  +  G    L+     V      +G F D  +  +L         P+  M
Sbjct: 237 PFTAVVAYNDNMAAGALLVLEENGHSVPEHVSVIG-FDDALISRYLRPRLTTVRYPIQLM 295

Query: 290 AQQHGQIAATALELALAAIEEKRYEPGVHAVGRTFKQRISVA 331
           A++     AT L LALA    +  +P + +   T  +R SVA
Sbjct: 296 AEK-----ATQLALALATDAPRENDPMIFS--PTIVRRDSVA 330