Pairwise Alignments

Query, 331 a.a., catabolite repressor-activator, DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

Subject, 356 a.a., catabolite repressor protein from Sinorhizobium meliloti 1021

 Score =  107 bits (267), Expect = 4e-28
 Identities = 92/338 (27%), Positives = 151/338 (44%), Gaps = 42/338 (12%)

Query: 5   DIARLAGVSVTTASYVINGKAEQQRISNSTVERVRAVVEAHGFTPNPQAAGLRSRHTRTL 64
           D++ L+G S +T S V+NG   ++RI  ST E +R++ E H +T N QA GLRS  +  +
Sbjct: 13  DLSVLSGSSPSTVSAVLNGTWRKRRIKESTAELIRSLAETHQYTANRQARGLRSSRSGLV 72

Query: 65  GFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVA 124
           G +LP  +N  ++ +A+  E   R++G   ++ S+   P+ ER+  +   +   D LF+ 
Sbjct: 73  GLLLPVHDNRYFSSLAQTFEAHVRSKGQCPIVVSASRDPEEERRTAETLISYSIDELFIC 132

Query: 125 SCLPPEDDSYRELQDKGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSS------- 177
               P D  +   +  GL  I ID  L      SVISD+ +  R L  +++         
Sbjct: 133 GATDP-DGVHEVCEAAGLRHINID--LPGTKVPSVISDNFEGGRLLTEAIIRHFPAERPL 189

Query: 178 APRSIALIGARPELSVSQARAGGF------------DEAL--QGYTGEVRRYQGEAFSRE 223
            P  + L G R +   ++ R  GF            DE +   GY  +  R   EAF  +
Sbjct: 190 EPDDLYLFGGRDD-HATRERIRGFRAVKSDLLGADPDECIWPTGYAADNARKAFEAFYEQ 248

Query: 224 CGQRLMQQLIDDLGGLPDALVTTSYVLLQGVFDTLQARPVDS-RQLQLGTFGDNQLLDFL 282
            G+            LP      S +  +G+   +   P+++   L +G +  +    FL
Sbjct: 249 HGK------------LPRGFFVNSSINFEGLLRFMAEHPLENFTDLVVGCYDYDPFASFL 296

Query: 283 PLPVNAMAQQHGQIAATALELALAAIEEKRYEPGVHAV 320
           P PV  + Q    + A A E+    IEE R    +H +
Sbjct: 297 PFPVIMIRQNIEGMIAKAFEV----IEEPRASLQIHMI 330