Pairwise Alignments

Query, 276 a.a., Inner membrane protein AmpE from Pseudomonas putida KT2440

Subject, 306 a.a., cobalamin biosynthesis protein cobD/CbiB from Dechlorosoma suillum PS

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 86/310 (27%), Positives = 126/310 (40%), Gaps = 44/310 (14%)

Query: 1   MSFLVLLLALWVEKFSALRHQ-----VQRDGFFIGELVRLERNGKVHPWWTLAILVLAPV 55
           MS   L+ AL++E+F  L ++     V R   F+    RL      H        VL PV
Sbjct: 1   MSLFSLIAALFLEQFRPLPNRLLLEPVGRYADFLES--RLNAGDSRHGLIAWLAAVLPPV 58

Query: 56  ALLVLLLHVLEPVAYGLLALPVHLLVLIYSLGRGDAKASLGAFRDAWRRGDDQAA--LHA 113
            L   + ++L  V   LL    ++LVL  ++G             A R GD   A  L A
Sbjct: 59  LLAAGIYYLLCAVT-PLLGWAWNVLVLYLTMGFRQFSHHFTDIHLALRMGDVPRARQLLA 117

Query: 114 AERDL---GLVADEPHSLLVRVQGNLLWQVYQGFFAVIFWYFVL-GPGAALAYRLLALCS 169
             R     GL + E   L +      L   ++  FAVI  + +L GP  A+ YRL  + +
Sbjct: 118 EWRGRSAEGLSSSEVARLAIE---EALAASHRHVFAVILCFVLLPGPCGAVLYRLAGILA 174

Query: 170 EHSKQPA------LKARAEQLRHIMDWLPVRALALSFALVGNFLAVTRVMLHEVLNW--- 220
           E   Q            ++Q+  I+DWLP+RA A +FA+VG+F         +   W   
Sbjct: 175 ERWGQRQDEEFGDFGKFSQQIFAIIDWLPLRATAAAFAVVGDFEDAVYCWRTQAGQWADH 234

Query: 221 ------HISAGHLVARVGRIADDIPEEED-SQRGLGR------LDSLWELLLRCAVLW-- 265
                    AG L  R+G+   +  E  D ++ G+G       + S   L+ R  VLW  
Sbjct: 235 ELGIVLSSGAGALGVRLGQPLVEGGEVTDRAELGVGEEADVDFMQSTVGLVWRALVLWLL 294

Query: 266 ---YAGFALW 272
                G A W
Sbjct: 295 LLLLIGLATW 304