Pairwise Alignments

Query, 190 a.a., N-acetyl-anhydromuramyl-L-alanine-amidase from Pseudomonas putida KT2440

Subject, 317 a.a., N-acetylmuramoyl-L-alanine amidase, family 2 from Synechococcus elongatus PCC 7942

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 50/198 (25%), Positives = 71/198 (35%), Gaps = 32/198 (16%)

Query: 4   DYATGWFHGIGITHCPSPNFNARPEGESISLLVIHNISLPPACFGTGKVQQFFQNRLAPD 63
           D  + W H        + + N +P    ISL+V+H                FFQ     D
Sbjct: 110 DVRSAWAHPTNFGDRAAVDRNGQPVDNRISLIVLHE-----TVASADSAINFFQTPHPRD 164

Query: 64  EHPYFASINHLTVSAHLFVERDGAVTQFVSLHDRAWHAGVSSFDGRE---------GCND 114
           E            S H  + R+G +   V    RA+ AG SSF G             N+
Sbjct: 165 EDQ---------ASYHALIRRNGTIVYTVPPEKRAFGAGSSSFRGEAVRFNPKLPGSVNN 215

Query: 115 FSIGIELEGTDD--------LPYTDAQYAVLEQLTRHIRSAWPAIDLNRIQGHSDIAPQR 166
           FS+ + LE   D          YT  QY  L  L +   + +  I  +RI  H+ +    
Sbjct: 216 FSLHVSLESPADGRDNRRRHSGYTARQYDSLALLAQQWMTTY-TIPGDRITTHAAVDRSG 274

Query: 167 KTDPGPAFDWSRYRQALQ 184
                 +F W+R  Q LQ
Sbjct: 275 SRMDPRSFQWARLAQRLQ 292