Pairwise Alignments

Query, 446 a.a., Methyl-accepting chemotaxis transducer/sensory box protein from Pseudomonas putida KT2440

Subject, 421 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  318 bits (815), Expect = 2e-91
 Identities = 173/407 (42%), Positives = 253/407 (62%), Gaps = 2/407 (0%)

Query: 39  MLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRNIEDI-VPAHVKSLDFYQRMKSAISRG 97
           M V++  P G++   N NF   M YRA+QL G +  D   PA V S + Y+   + +  G
Sbjct: 1   MAVIEFSPDGKVLRANENFLGTMGYRADQLAGLSHRDFCTPALVGSAE-YREFWNQLRAG 59

Query: 98  EHLNGAFRLLRGNGQEAWLRSILQPVKNSEGRIKYFTLHSSDLTRTIETSREHESLIKAL 157
           + ++G F+     GQ  WL +   P+ + +GR+     ++ D+T  + +  E    + AL
Sbjct: 60  QFVSGTFQRRSAQGQNVWLEASYNPIVDEQGRVVKVVKYALDVTAKVASEAETRGRLAAL 119

Query: 158 MRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRGKHHRMFCEPQEVNSAGYQAFWERLR 217
            R+ AVIEFDL G ILTAND F+  + Y L +++GKHHRMFCEP  V S+ Y  FW RL 
Sbjct: 120 DRAMAVIEFDLGGHILTANDNFMNVMNYTLAELKGKHHRMFCEPSLVGSSEYSDFWRRLN 179

Query: 218 RGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVLYKVVKFATVITDQVNQELAVAEAAD 277
            GE+ + +FKR+  +G+V+WLEASYNP++DA   L K+VKFA+ I+++V +    +  A 
Sbjct: 180 AGEFFSGQFKRLGKNGKVVWLEASYNPVYDAEGKLCKIVKFASDISERVEKFEEDSRGAS 239

Query: 278 VAYNTSLGTDVSARKATEVVTQTVTVMRGLEASMQEAADGIQALDTQSRVIGSIIKTISD 337
            AY+ S  T+  A +  +V+ QT   MR +  ++  +A  +  L  +S  I +I+ TI  
Sbjct: 240 RAYHISAETERVAEQGAQVIHQTAKEMREIADNIGSSARLVGQLGARSEEITAIVNTIRG 299

Query: 338 IAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSTATEEIARVVQQNEQLAQA 397
           IA QTNLLALNAAIEAARAG+QGRGFAVVADEVRQLA RTS +T EIA ++       + 
Sbjct: 300 IADQTNLLALNAAIEAARAGDQGRGFAVVADEVRQLAGRTSRSTSEIAEMIGMILSETRD 359

Query: 398 AVSIIDTSKRQAEQGLALADETGSVIVEIQDGAKRVVDVVGQFSSRL 444
           AV+ ++ +   A +G+ LAD+ GSVIV+I++G    ++ V  F+S+L
Sbjct: 360 AVASMNVTHEGALRGVTLADQAGSVIVQIRNGTTDALEAVSMFASKL 406



 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 33  SSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRN----IEDIVPAHVKSLDFYQ 88
           ++LD  M V++ D  G I   N NF + M Y   +L G++     E  +    +  DF++
Sbjct: 117 AALDRAMAVIEFDLGGHILTANDNFMNVMNYTLAELKGKHHRMFCEPSLVGSSEYSDFWR 176

Query: 89  RMKSAISRGEHLNGAFRLLRGNGQEAWLRSILQPVKNSEGRIKYFTLHSSDLTRTIETSR 148
           R+ +    GE  +G F+ L  NG+  WL +   PV ++EG++      +SD++  +E   
Sbjct: 177 RLNA----GEFFSGQFKRLGKNGKVVWLEASYNPVYDAEGKLCKIVKFASDISERVEKFE 232

Query: 149 E 149
           E
Sbjct: 233 E 233