Pairwise Alignments

Query, 446 a.a., Methyl-accepting chemotaxis transducer/sensory box protein from Pseudomonas putida KT2440

Subject, 654 a.a., Methyl-accepting chemotaxis protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  233 bits (593), Expect = 2e-65
 Identities = 157/480 (32%), Positives = 237/480 (49%), Gaps = 62/480 (12%)

Query: 6   RAVMFNNKLKQEIRQLREDLMSIEQVKSSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRA 65
           R V +   +  ++RQ  +     E    ++D  M V++    G +   N NF   M YR 
Sbjct: 122 RVVKYATDITAQVRQTAD----FEGRIDAIDKVMAVIEFSLDGTVLDANANFLEVMGYRL 177

Query: 66  EQLLGRNIEDIV-PAHVKSLDFYQRMKSAISRGEHLNGAFRLLRGNGQEAWLRSILQPVK 124
           +++ G++    V PA  +S + Y+     + RGE   G ++ +  +G+E W+++   PV 
Sbjct: 178 DEIRGQHHRLFVEPAQRQSAE-YRVFWEKLGRGEFDAGRYKRVGRDGREVWIQASYNPVL 236

Query: 125 NSEGRIKYFTLHSSDLTRTIETSREHESLIKALMRSTAVIEFDLDGIILTANDRFLATVG 184
           +  GR      +++D+TR +  S + +  I+A+ +   VIEFDLDG +L+AND FLA +G
Sbjct: 237 DERGRPYKVIKYATDITRQVVESADADGRIQAIAKVMGVIEFDLDGRVLSANDNFLAILG 296

Query: 185 YRLEQIRGKHHRMFCEPQEVNSAGYQAFWERLRRGEYIAERFKRIDAHGRVIWLEASYNP 244
           YR ++  GKHH +F +     S  Y+ FW  L RG++ A R++R+   G   W++ASYNP
Sbjct: 297 YRADEAIGKHHSVFVDAAYSASEDYRQFWATLARGQFDAGRYRRLRKDGSTAWIQASYNP 356

Query: 245 IFDAHDVLYKVVKFATVITDQV------------------------------NQELA--V 272
           I D     YKVVK+AT +TDQV                              NQEL    
Sbjct: 357 ILDVSGRPYKVVKYATDVTDQVRSAERMRDLVRQTMGIAQNVQREAHHISASNQELVSRA 416

Query: 273 AEAADVAYNTSLGTD----------VSARKATEVVTQTVTVMRGLEASMQEAADGIQALD 322
           A  +D    TS   +           +A  A  +  ++ TV R     + E      ++ 
Sbjct: 417 ASQSDAVQQTSTSIEQLAETVRANSENAGAAQHMAEESATVARKGAHVIAEVVQTTSSIR 476

Query: 323 TQSRVIGSIIKTISDIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSTATE 382
             +  IG II+ I  IA QTN+LALNAA+EAARAGEQGRGFAVVA EVR LA R S +  
Sbjct: 477 KATDRIGQIIEVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRCSVSAR 536

Query: 383 EIARVVQQNEQLAQAAVSIIDTSKRQAEQGLALADETGSVIVEIQDGAKRVVDVVGQFSS 442
           EI               S+I+ +  Q   G  LA++ G V+ ++     +V   V Q ++
Sbjct: 537 EIR--------------SLIEDATNQVGDGSRLAEQAGKVMQDMVTSVLKVTATVEQIAA 582



 Score =  184 bits (466), Expect = 1e-50
 Identities = 136/472 (28%), Positives = 217/472 (45%), Gaps = 65/472 (13%)

Query: 28  IEQVKSSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRNIEDIVPAHVKSLDFY 87
           ++   +++D  M V++ D +GRI   N NF + M YR E ++G++    V    +  D Y
Sbjct: 18  LQHKATAMDRVMAVIEFDLEGRILDANHNFLALMGYRLEDVVGKHHRMFVHPSERESDGY 77

Query: 88  QRMKSAISRGEHLNGAFRLLRGNGQEAWLRSILQPVKNSEGRIKYFTLHSSDLTRTIETS 147
           ++    + RG+   G +  L    +E W+ +   P+ +  G+      +++D+T  +  +
Sbjct: 78  RQFWDTLRRGDFHAGRYCRLGNGEREVWINASYNPLLDRSGKPYRVVKYATDITAQVRQT 137

Query: 148 REHESLIKALMRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRGKHHRMFCEPQEVNSA 207
            + E  I A+ +  AVIEF LDG +L AN  FL  +GYRL++IRG+HHR+F EP +  SA
Sbjct: 138 ADFEGRIDAIDKVMAVIEFSLDGTVLDANANFLEVMGYRLDEIRGQHHRLFVEPAQRQSA 197

Query: 208 GYQAFWERLRRGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVLYKVVKFATVITDQVN 267
            Y+ FWE+L RGE+ A R+KR+   GR +W++ASYNP+ D     YKV+K+AT IT QV 
Sbjct: 198 EYRVFWEKLGRGEFDAGRYKRVGRDGREVWIQASYNPVLDERGRPYKVIKYATDITRQVV 257

Query: 268 QEL-------AVAEAADVAYNTSLGTDVSAR---------KATEVVTQTVTVMRGLEASM 311
           +         A+A+   V      G  +SA          +A E + +  +V      S 
Sbjct: 258 ESADADGRIQAIAKVMGVIEFDLDGRVLSANDNFLAILGYRADEAIGKHHSVFVDAAYSA 317

Query: 312 QE----------------------AADG----IQA-----LDTQSRVIGSIIKTISDIAG 340
            E                        DG    IQA     LD   R    ++K  +D+  
Sbjct: 318 SEDYRQFWATLARGQFDAGRYRRLRKDGSTAWIQASYNPILDVSGRPY-KVVKYATDVTD 376

Query: 341 -------------QTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSTATEEIARV 387
                        QT  +A N   EA       +     A        +TST+ E++A  
Sbjct: 377 QVRSAERMRDLVRQTMGIAQNVQREAHHISASNQELVSRAASQSDAVQQTSTSIEQLAET 436

Query: 388 VQQNEQLAQAAVSIIDTSKRQAEQGLALADETGSVIVEIQDGAKRVVDVVGQ 439
           V+ N + A AA  + + S   A +G  +  E    +V+     ++  D +GQ
Sbjct: 437 VRANSENAGAAQHMAEESATVARKGAHVIAE----VVQTTSSIRKATDRIGQ 484