Pairwise Alignments

Query, 446 a.a., Methyl-accepting chemotaxis transducer/sensory box protein from Pseudomonas putida KT2440

Subject, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  192 bits (489), Expect = 2e-53
 Identities = 138/485 (28%), Positives = 222/485 (45%), Gaps = 99/485 (20%)

Query: 39  MLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRNIEDIVPAHVKSLDFYQRMKSAISRGE 98
           + +L+ +P G I   +  F       AE ++G +  ++   H +     QR+     +G 
Sbjct: 76  LALLECEPNGTICYASDAFAHLCRVSAEAMVGADFANLWRTHQQPS--VQRLLQDAKKGH 133

Query: 99  HLNGAFRLLRGNGQEA-WLRSILQPVKNSEGRIKYFTLHSSDLTRTIETSREHESLIKAL 157
            ++   +L R   QEA W+++ L P+K   G+++   +   D+T       +    + A+
Sbjct: 134 PVSAELQLSRS--QEAIWIKADLYPIKAINGQLQNVVVLLQDITAAKLEKIDRSGQMNAV 191

Query: 158 MRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRGKHHRMFCEPQEVNSAGYQAFWERLR 217
             + AVIEF LDG ILTAN  FL TVGY+L++I+G+HH MF + Q   S  YQ FW+RLR
Sbjct: 192 NLTQAVIEFTLDGTILTANQNFLQTVGYQLDEIQGRHHSMFVDEQYKQSQEYQHFWQRLR 251

Query: 218 RGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVLYKVVKFATVIT------DQVNQELA 271
            GE+  + +KR    G+ IW++ASYNPI D+    YKVVK+AT +T      ++V + + 
Sbjct: 252 SGEFFVDEYKRFGKGGKEIWIQASYNPIMDSEGKPYKVVKYATNVTQRKMVVNEVKRVMT 311

Query: 272 VAEAADVAYNTSLGTDVSARKATEVVTQTVTVMR-------------------------G 306
              + D++   +   +    +  EV++Q +  +R                          
Sbjct: 312 ALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATEISNGNTD 371

Query: 307 LEASMQEAADGIQALDTQSRVIGSIIKTISDIAGQTNLL--------------------- 345
           L +  ++ A  ++   +    + S ++  SD A Q N+L                     
Sbjct: 372 LSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGELIEQVVVT 431

Query: 346 ----------------------------ALNAAIEAARAGEQGRGFAVVADEVRQLASRT 377
                                       ALNAA+EAARAGEQGRGF+VVA EVR LA R+
Sbjct: 432 MASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRSLAQRS 491

Query: 378 STATEEIARVVQQNEQLAQAAVSIIDTSKRQAEQGLALADETGSVIVEIQDGAKRVVDVV 437
           + A ++I               ++I  S  +   G  L D +GS + +I    KRV D++
Sbjct: 492 ANAAKDIK--------------ALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLM 537

Query: 438 GQFSS 442
              +S
Sbjct: 538 ADIAS 542