Pairwise Alignments
Query, 446 a.a., Methyl-accepting chemotaxis transducer/sensory box protein from Pseudomonas putida KT2440
Subject, 710 a.a., PAS from Pseudomonas syringae pv. syringae B728a
Score = 241 bits (615), Expect = 6e-68
Identities = 141/412 (34%), Positives = 225/412 (54%), Gaps = 21/412 (5%)
Query: 33 SSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRNIEDIVPAHVKSLDFYQRMKS 92
++++ V++ D G++ N NF + Y ++++G + S Y+ +
Sbjct: 268 TAIERSQAVIEFDLTGKVLHANRNFLAVFGYDLDEIVGEHHRMFCSEEFVSSLQYRELWE 327
Query: 93 AISRGEHLNGAFRLLRGNGQEAWLRSILQPVKNSEGRIKYFTLHSSDLTRTIETSREHES 152
+ RGE+ ++ R +G+E W+++ P+ +++G+ + D+T ETS E +
Sbjct: 328 KLGRGEYDANEYKRKRKDGKEIWIQATYNPIFDAQGKPYKIVKFALDVTVAKETSVEDQG 387
Query: 153 LIKALMRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRGKHHRMFCEPQEVNSAGYQAF 212
+ A+ R+ AVIEFD+ G I+TAN FL +GY L +I+GKHHR+FCE + V Y+ F
Sbjct: 388 KVNAIDRAQAVIEFDMAGNIITANANFLKALGYGLLEIKGKHHRIFCEEEYVRGTEYREF 447
Query: 213 WERLRRGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVLYKVVKFATVITDQVNQELAV 272
W L +GE+ + RF R+ +G+ IW++A+Y+PIFD + +KVVKFAT IT QV E A+
Sbjct: 448 WHGLGQGEFYSGRFMRVSKYGQKIWIQATYSPIFDHDGLPFKVVKFATDITRQVEMEQAI 507
Query: 273 -------AEAADVAYNTSLGTDVSARKATEVVTQTVTVMRGLEASMQEAADGIQALDTQS 325
E+ N S AT++ T R ++ +A+D + + +
Sbjct: 508 EAKTRAMGESVKALMNAISYVAQSTETATDLARMTREQARSGSQTLVKASDAMGMIAKSA 567
Query: 326 RVIGSIIKTISDIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSTATEEIA 385
I II+ IS+IA QTN+LA NAAIEAARAGE G GF+VVADEVR+LA ++S AT+EI
Sbjct: 568 EGIQDIIQVISEIASQTNMLAFNAAIEAARAGEHGLGFSVVADEVRKLAEKSSRATKEIN 627
Query: 386 RVVQQNEQLAQAAVSIIDTSKRQAEQGLALADETGSVIVEIQDGAKRVVDVV 437
++ I++T R E G ++ G I +G + +
Sbjct: 628 KL-------------ILETVSR-IESGNEISRSAGEAFEHIVEGVMQTTQAI 665
Score = 178 bits (451), Expect = 6e-49
Identities = 89/240 (37%), Positives = 143/240 (59%), Gaps = 2/240 (0%)
Query: 26 MSIEQVKSSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRNIEDI-VPAHVKSL 84
+ + + +++D +++ D G I N NF + YR +++ GR+ P H S+
Sbjct: 17 LDLHSLMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQGRHHRMFCTPEHASSV 76
Query: 85 DFYQRMKSAISRGEHLNGAFRLLRGNGQEAWLRSILQPVKNSEGRIKYFTLHSSDLTRTI 144
+ Y + +G G ++ L NG+E WL++ PV + +G ++D+T
Sbjct: 77 E-YVTFWEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGNPFKVVKFATDVTAQR 135
Query: 145 ETSREHESLIKALMRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRGKHHRMFCEPQEV 204
+++ E+E + A+ RS +IEFDL+G +L AN+ FL +GYRL++I+G+HHRMFCE +
Sbjct: 136 KSNAEYEGKVAAIDRSQGIIEFDLNGRVLNANENFLKVLGYRLDEIQGQHHRMFCEDDYL 195
Query: 205 NSAGYQAFWERLRRGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVLYKVVKFATVITD 264
NS Y+AFW +L RGEY + +KRI +GR +W+ A+YNPIFD YKVVKFA +T+
Sbjct: 196 NSPAYRAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPDGRPYKVVKFANDVTE 255
Score = 170 bits (430), Expect = 2e-46
Identities = 119/464 (25%), Positives = 215/464 (46%), Gaps = 33/464 (7%)
Query: 13 KLKQEIRQLREDLMSIEQVKSSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRN 72
K ++ R+ E +++D +++ D GR+ N NF + YR +++ G++
Sbjct: 126 KFATDVTAQRKSNAEYEGKVAAIDRSQGIIEFDLNGRVLNANENFLKVLGYRLDEIQGQH 185
Query: 73 IEDIVPAHVKSLDFYQRMKSAISRGEHLNGAFRLLRGNGQEAWLRSILQPVKNSEGRIKY 132
+ Y+ + + RGE+ +G ++ + NG+E W+ + P+ + +GR
Sbjct: 186 HRMFCEDDYLNSPAYRAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPDGRPYK 245
Query: 133 FTLHSSDLTRTIETSREHESLIKALMRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRG 192
++D+T + E + A+ RS AVIEFDL G +L AN FLA GY L++I G
Sbjct: 246 VVKFANDVTESRIRQAESAGKVTAIERSQAVIEFDLTGKVLHANRNFLAVFGYDLDEIVG 305
Query: 193 KHHRMFCEPQEVNSAGYQAFWERLRRGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVL 252
+HHRMFC + V+S Y+ WE+L RGEY A +KR G+ IW++A+YNPIFDA
Sbjct: 306 EHHRMFCSEEFVSSLQYRELWEKLGRGEYDANEYKRKRKDGKEIWIQATYNPIFDAQGKP 365
Query: 253 YKVVKFATVITDQVNQELAVAEAADVAYNTSLGTDVSARKATEVVTQTVTVMRGLEASMQ 312
YK+VKFA +T V +E +V + V + A ++T ++ L +
Sbjct: 366 YKIVKFALDVT--VAKETSVEDQGKVNAIDRAQAVIEFDMAGNIITANANFLKALGYGLL 423
Query: 313 EAADGIQALDTQSRVI-GSIIKTISDIAGQTNLLALNAAIEAARAGEQ------------ 359
E + + + G+ + GQ + + ++ G++
Sbjct: 424 EIKGKHHRIFCEEEYVRGTEYREFWHGLGQGEFYS-GRFMRVSKYGQKIWIQATYSPIFD 482
Query: 360 --GRGFAVV---ADEVRQ------LASRTSTATEEIARVVQQNEQLAQAAVSIIDTSK-- 406
G F VV D RQ + ++T E + ++ +AQ+ + D ++
Sbjct: 483 HDGLPFKVVKFATDITRQVEMEQAIEAKTRAMGESVKALMNAISYVAQSTETATDLARMT 542
Query: 407 ----RQAEQGLALADETGSVIVEIQDGAKRVVDVVGQFSSRLSL 446
R Q L A + +I + +G + ++ V+ + +S+ ++
Sbjct: 543 REQARSGSQTLVKASDAMGMIAKSAEGIQDIIQVISEIASQTNM 586
Score = 132 bits (331), Expect = 5e-35
Identities = 61/114 (53%), Positives = 83/114 (72%)
Query: 152 SLIKALMRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRGKHHRMFCEPQEVNSAGYQA 211
SL+ A+ RS A+IEFDLDG IL AN FL VGYRL++++G+HHRMFC P+ +S Y
Sbjct: 21 SLMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQGRHHRMFCTPEHASSVEYVT 80
Query: 212 FWERLRRGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVLYKVVKFATVITDQ 265
FWE+L +G + ++KR+ +GR IWL+A+YNP+FD +KVVKFAT +T Q
Sbjct: 81 FWEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGNPFKVVKFATDVTAQ 134