Pairwise Alignments

Query, 236 a.a., OmpA/MotB domain-containing protein from Pseudomonas putida KT2440

Subject, 266 a.a., outer membrane protein, OmpA family (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  110 bits (275), Expect = 3e-29
 Identities = 82/232 (35%), Positives = 121/232 (52%), Gaps = 30/232 (12%)

Query: 1   MRRLIIVATAAALMTGCAGQNPYDNQGQAQGSTGMSKTAKYGGLGALAGAIAGAAIDHNN 60
           M+ +++  +   + +GCA  N    +G A G          GG GA  GAI G  I    
Sbjct: 32  MKWMVLFMSITMIFSGCASMNN-TGKGAAIG----------GGSGAALGAILGGVI---G 77

Query: 61  RGKGALIGAAAVGAAAAGYGYYADKQEAELRAQMANT-GVEVQRQGDQ-----IKLIMPG 114
           +GKGA IGAA   A  AG G    K+  +  A+     G +V++  D      +K+    
Sbjct: 78  KGKGAAIGAAIGTAVGAGTGALIGKKMDKAAAEAKQIEGAQVEQITDNNGLQAVKVTFDS 137

Query: 115 NITFATDSANIAPSFYSPLNNLAGSFKQFNQNT-IEVVGFTDSTG--------SRQHNMD 165
            I F T +A ++ +  S L+  A +    N++  + + G+TD+ G        SRQ N++
Sbjct: 138 GILFTTGNATLSAAAKSALSKFANNVLNQNRDMDVSIYGYTDNQGWRNSTAEQSRQKNLN 197

Query: 166 LSQRRAQAVSTYLTSQGVDASRIS-VRGMGPDQPIASNADANGRAQNRRVEV 216
           LSQ RAQ+V++YL + GV +++I  V+GMG   PIASN  A GR QNRRVEV
Sbjct: 198 LSQERAQSVASYLLNCGVSSNQIKGVQGMGESDPIASNDTAAGREQNRRVEV 249