Pairwise Alignments

Query, 230 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 25/226 (11%)

Query: 13  VIASTVHDLKSSLS-ALIQSHSQWVERLPEELRGGAEQGIME--HEF-RHLNGMLVQLLG 68
           ++AS  H +++ LS A++ + +     LP   R   +  +++  H+  + +N ML     
Sbjct: 129 MVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSKLVDRLHDLEKQVNDML----- 183

Query: 69  LYKLGVNQLPVCPDYHELDDFIEAQLAAHEEVLKHNDILATWRIDTDNPLGFFDRELVAS 128
           L+  G +   V P    + D     +   E  LK+N I     ++++  +   +   +AS
Sbjct: 184 LFAKGGDNKVVMP--FSIGDLAAEFMPMVETALKNNQIDYGQEVESEETMLLGNANALAS 241

Query: 129 VIANVITNATRFAGHALLITI--EEADNQLAICVNDDGPGYPKHMLERQEDYIQGIDST- 185
            ++N++ NA + AG    I +     + +L I V D+GPG P+ +   Q   ++   +T 
Sbjct: 242 ALSNLVMNALQIAGKGSQIDVFFRPVNGELKISVQDNGPGVPESL---QHKIMEPFFTTR 298

Query: 186 SGSTGLGLYFAARIAALHESGGVRGRIE-ISNGGALGGGLFRLFLP 230
           S  TGLGL     +   H      GR+E IS  G   G  F + +P
Sbjct: 299 SQGTGLGLAVVQMVCRAH-----GGRLELISKEGE--GACFTMCIP 337