Pairwise Alignments

Query, 230 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 994 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 57/188 (30%), Positives = 84/188 (44%), Gaps = 31/188 (16%)

Query: 56  FRHLNGMLVQLLGLYKLGVNQLPVCPDYHELDDFIEAQLAAHEEVL-KHNDILATWR--- 111
           +RH+N     LL + KL   ++ +         + E  LA    V+  H D LA  R   
Sbjct: 265 YRHVN----DLLDVAKLEAGRMVM--------HYTEGDLAHLTRVIASHFDSLAEGRRVR 312

Query: 112 -IDTDNP--LGFFDRELVASVIANVITNATRFAGH--ALLITIEEADNQLAICVNDDGPG 166
            + T  P      D E    ++ N+++NA +FAG   A+ + +  A  Q  I V D+GPG
Sbjct: 313 YVVTTPPDLTAQVDAEKYQRILLNLLSNAFKFAGDGGAIQLRLTAAGGQARIEVEDNGPG 372

Query: 167 YPKHMLERQEDYIQGIDSTS----GSTGLGLYFAARIAALHESGGVRGRIEISNGGALGG 222
            P+ M E+  +  + ++  S    G TGLGL     +A LH  G VR      +     G
Sbjct: 373 IPEAMREQVFEPFRQVEGGSSRHHGGTGLGLAIVRELAQLH-GGSVR-----IDAAPSSG 426

Query: 223 GLFRLFLP 230
            LF L LP
Sbjct: 427 ALFTLELP 434



 Score = 35.0 bits (79), Expect = 5e-06
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 9/126 (7%)

Query: 110 WRIDTDNPLGFFDRELVASVIANVITNATRF----AGHALLITIEEADNQLAICVNDDGP 165
           W+++ D  +   D  ++  V+ N++ NA ++    A   + +     + Q+  C+ D+G 
Sbjct: 857 WQVE-DGLVARGDIRMIGVVLRNLLGNAWKYTARTAAPLIRVHARRQEKQIQFCIADNGA 915

Query: 166 GYPKHMLERQEDYIQGIDSTSGSTGLGLYFAARIAALHESGG-VRGRIEISNGGALGGGL 224
           G+    + +     Q +       G+G+  A     +H  GG +  R E  +G +     
Sbjct: 916 GFDMAQVGKLFQPFQRLHRQDEFPGIGIGLATVQRVVHRHGGSIEARGEAGHGASF---C 972

Query: 225 FRLFLP 230
           F L LP
Sbjct: 973 FTLPLP 978