Pairwise Alignments

Query, 535 a.a., Response regulator/TPR domain protein from Pseudomonas putida KT2440

Subject, 541 a.a., response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain from Dechlorosoma suillum PS

 Score =  220 bits (560), Expect = 1e-61
 Identities = 160/533 (30%), Positives = 268/533 (50%), Gaps = 22/533 (4%)

Query: 2   LQYGQKSFLIVDDFTDFRTSTRSMLRELGVRD--VDTADSGEQALRMCAQKRYDFILQDF 59
           + +G KSFL++DDF   RT  R +LR +GV    + TA +G +A+   +Q R+D +L DF
Sbjct: 7   IDFGSKSFLVIDDFQGMRTVLRDILRSMGVNPKVIATAANGNEAISQLSQTRFDGVLCDF 66

Query: 60  HLGDGKKNGQQVLEDLIIDKHISHECVFIMVTAESSQAIVLSAIEHEPDAYLTKPFNRVG 119
           +LG GK NGQQVLE+      +   C ++M+TAE +  +V+ A E++PDAYL KP     
Sbjct: 67  NLGAGK-NGQQVLEEAKYRNLVGPSCAWVMITAEKTADVVMGAAEYQPDAYLLKPITEST 125

Query: 120 LAQRVEKLFQRKTLLKPILQALDRNRPAEVLAACAELCKKDPRLAPLCLRYRADALRNLN 179
           L  R+EK++ +K     I QA+        +  C E    D   A   LR +   L    
Sbjct: 126 LRLRLEKIWVKKAAFVDIDQAVMAMDFPLAIRLCDERLAVDKANAGELLRLKCHLLLVSG 185

Query: 180 RFEELEKFLKAILASRPQPWVYAALGALMHKRGQNAQAQGVYEQALKAFPIMPGLYDGMA 239
             E+      A+LA R  PW    L  +    G+   AQ + E  +         +D +A
Sbjct: 186 EHEQARLLYNALLAKRDVPWAQLGLARVHVAAGELDHAQALLETLVAENRTYLEAHDWLA 245

Query: 240 EVLVAQGDTRRAQNLLEEAVRLSPLSVRRQSTLGKLALENEDFESASKAFRHAVNQGQSS 299
            V  A+GD ++A+ +LE A RLSPLSV RQ  LG+++L+    E+A KAFR +V  G+ S
Sbjct: 246 NVHNARGDLQKAEEVLENAARLSPLSVMRQKNLGEVSLQLGKVENAEKAFRKSVALGEHS 305

Query: 300 RYKDAENNLGLVQALMSKNAGFGLDARTRVEINTTLSEVAKENPEDQGLQVRARMMKAAS 359
             K  +  LGL +A  ++N     +++  +++ +TL+    +  + + ++V+A   +   
Sbjct: 306 VLKTPDAYLGLARACSAQN-----NSKEALQVLSTLT----KQFDAEEVKVKAMATEGMV 356

Query: 360 LQQAGDPETAGKLTEQAIQRLDKMNQFFSVDSALTVAAQLQAM-GQEAAAIGVLKNCVES 418
             +AGD E+A K+  +  + L +        +A+   A+L  + G++  A  +L+  V +
Sbjct: 357 YHRAGDLESARKVALKLDEVLAQPGAPRLESAAVVEMAELMMVSGEKEKAAALLQGEVRN 416

Query: 419 YGDDPKVMEKVGKLTDDPS--------VLNAITEAVTLNRQGVRSYQGGQLGEALQLFRK 470
             DD  +++++ ++ D  +        V  +  EAV L  QGV   + G+  EA++  R 
Sbjct: 417 NPDDAILLQRIQQVFDTGAMSEEGVALVEASRKEAVQLMNQGVLLARDGKFDEAMEAMRT 476

Query: 471 ALGLQPKNISIALNTA-QALLRIGGDNPQPAIMQECRDALTSVAGIPASDNRY 522
           A    P N+ +  N A   +  +      P+++ E R  L +   +  +D RY
Sbjct: 477 ACERLPGNVRVLFNFAHMGITFMQRTVVSPSLVDEIRQHLETAHRLAPADKRY 529