Pairwise Alignments

Query, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

Subject, 912 a.a., Transcriptional regulator, LuxR family from Pseudomonas fluorescens FW300-N1B4

 Score = 1373 bits (3553), Expect = 0.0
 Identities = 703/911 (77%), Positives = 780/911 (85%), Gaps = 7/911 (0%)

Query: 1   MTDLSRTHGFASQALGLRDGRFFRPPLPDGHVPRLRLCQRLEAGLGGRLLLVNAPAGFGK 60
           MTDLS   G AS A+   DGRFFRPPLPDGHV R RLC+RL AGLGGRLLLV+APAGFGK
Sbjct: 1   MTDLSPFPGPASVAVATLDGRFFRPPLPDGHVLRPRLCERLSAGLGGRLLLVSAPAGFGK 60

Query: 61  SSLAIEFCETLPEHWRSLWLGLSQRDADPGRFLERLLEGLQQYCPALGGQAMGLLKMRQR 120
           SSLA+EFC+ LP HW+SLWLGLS RD+DPGRFLERLLEGLQ+Y P LG QA+GLLKMRQR
Sbjct: 61  SSLAVEFCQGLPGHWQSLWLGLSLRDSDPGRFLERLLEGLQEYFPQLGRQALGLLKMRQR 120

Query: 121 HQPFAFEEWLDGLLDELALYLQADTPLLLVLDDYHLAQGPVLDRCLQFFLNHLPPGLVLL 180
           HQPFAFEEWLDGLLDELA++L   TPLLLVLDDYHLAQGPVLDRCLQFFLNHLP GL+++
Sbjct: 121 HQPFAFEEWLDGLLDELAVHLSPATPLLLVLDDYHLAQGPVLDRCLQFFLNHLPDGLLVM 180

Query: 181 VTSRQRPGWHLARLRLSRQLVELNEQDLRLTADESLAVIGRQPTGLRGQALDNLIQRSDG 240
           VTSRQRP WHLARLRLSRQL+EL+EQDLRLT DE+L+++ R    LRG+AL++LIQRS+G
Sbjct: 181 VTSRQRPDWHLARLRLSRQLLELHEQDLRLTHDETLSLLDRHSISLRGEALESLIQRSEG 240

Query: 241 WVAGLRFWQLAASDSADEQALPQALHGGEGLIRDYLLEEVIDRLPADVQAFLDETACQER 300
           WVAGLRFW LAAS++  E ALPQ+L+GGEGLIRDYLLEEVID LPA+VQ+FL ETA QER
Sbjct: 241 WVAGLRFWLLAASEAGSEGALPQSLYGGEGLIRDYLLEEVIDCLPAEVQSFLYETAPQER 300

Query: 301 FCAPLCDAMRGRHDSAAVLSFLQAHQVFLVPLDEHGHWFRYHHLFSDLLRSRQASESQV- 359
           FC+ LCDA+R  HDSA +L FL AHQVFLVPLDEHGHW+RYHHLFSDLLRSR  +++ V 
Sbjct: 301 FCSELCDAVREAHDSAEILRFLLAHQVFLVPLDEHGHWYRYHHLFSDLLRSRPTAQAIVP 360

Query: 360 --ALHLRACRWFEAQDLLDEAVEQALRAGHLDVAADLVQSLSEEQLLAEQNVGMLLRWKM 417
             +LHLRACRWF +Q LLDEAVEQALRAGHLDVAA+LVQ+LSEEQLLAEQNVGMLLRWKM
Sbjct: 361 TASLHLRACRWFNSQGLLDEAVEQALRAGHLDVAANLVQNLSEEQLLAEQNVGMLLRWKM 420

Query: 418 DLPDSLLISTPRLIVLYSWALGLACQLDAAEELAGYLSRFLPAPSATAQKSMLAQWLALS 477
           DLPDSLLISTPRLIVLYSWALGLACQLDAAEELA +LSRFLPAPSATAQKSMLAQWLALS
Sbjct: 421 DLPDSLLISTPRLIVLYSWALGLACQLDAAEELASHLSRFLPAPSATAQKSMLAQWLALS 480

Query: 478 GVIARGRGDRERTLAYCGEALQSLPSKRYGQRLVCLSTLSNLAIADGDFWRARGWNREAL 537
           G+IARGRG+RE TL YC EAL+SLP+KRYGQRL+CLSTLSNLAIAD D WRAR  NRE+L
Sbjct: 481 GIIARGRGNRELTLRYCTEALESLPAKRYGQRLMCLSTLSNLAIADSDLWRARELNRESL 540

Query: 538 ELAQRVGNPLFEALAHYDRARVLHARGEVLRALDEVRQGLQRLQGLSAQRLYAVRARLTL 597
           ELAQRVGNPLFEALAHYDRARVL ARGE+LR+LDEVRQGLQRLQGLS QRLYAVRARLTL
Sbjct: 541 ELAQRVGNPLFEALAHYDRARVLQARGEILRSLDEVRQGLQRLQGLSPQRLYAVRARLTL 600

Query: 598 YEGYLLVSRLQPAQGRARLRAGLGEARACRDISVLIGHCVIATLDGREGHFAEAFAELAE 657
           YEG+LL  RLQP   RARL+AGLGEARACRDISVLIGHCVIA LDG  G FA+AFAELAE
Sbjct: 601 YEGFLLALRLQPQAARARLQAGLGEARACRDISVLIGHCVIARLDGHNGEFAKAFAELAE 660

Query: 658 AERLMHIWDVPPVYYLAMITLVKCELWLAQGRTDLAESWLQRLGQTYGGEQPAAAPEFHP 717
           AERLMHIWDVPP+YYLAMITLVKCELWLAQGRTDLAE+WL RLGQTY GE PAA PEFHP
Sbjct: 661 AERLMHIWDVPPIYYLAMITLVKCELWLAQGRTDLAEAWLTRLGQTYNGEHPAAPPEFHP 720

Query: 718 LLPLHIALQQAALDRIQLRSDDAVQRLACLVKRGQASGGMMLTVSALSQWLALLLDEGKE 777
            LPLHI LQQA LD ++ +   A  RL  L + GQ SG  ML+V ALSQ + LLL  G+E
Sbjct: 721 QLPLHIELQQAVLDMMKGQPMLAEGRLNALHEHGQHSGRQMLSVMALSQKIMLLLAGGRE 780

Query: 778 GQAAQLLPSLLEAAHGGVMQPMQPLLEKHPQWLQEQLQAGAACPVQAELLKHLPPVP--- 834
            +A + L   LEAA GGV+QP  PLL +H  WL+ QLQ  A   V   L + LP +    
Sbjct: 781 SEARKALAQALEAAAGGVLQPFDPLLAEHSDWLRGQLQLCAPTAVSQSLSEKLPAMASRP 840

Query: 835 -IASTGNGEALSGREMAVLELIAQGCSNQQISERLFISLHTVKTHASHINSKLGVERRTQ 893
            + S+   E LS RE+AVL LIAQGCSNQ+IS++LFISLHTVKTHASHINSKLGVERRTQ
Sbjct: 841 VVESSPAAEQLSTRELAVLRLIAQGCSNQEISDQLFISLHTVKTHASHINSKLGVERRTQ 900

Query: 894 AVAKAKSLGLL 904
           AVA+AK LG+L
Sbjct: 901 AVARAKELGVL 911