Pairwise Alignments

Query, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

Subject, 873 a.a., ATP-dependent transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  431 bits (1108), Expect = e-124
 Identities = 309/885 (34%), Positives = 447/885 (50%), Gaps = 40/885 (4%)

Query: 25  PPLPDGHVPRLRLCQRLEAGLGGRLLLVNAPAGFGKSSLAIEFCETLPEHWRSLWLGLSQ 84
           P LP  HV R RL Q L      RL L+ APAGFGKS L  E    +P     +WL L  
Sbjct: 24  PRLPPLHVGRPRLVQAL-LDTDCRLRLICAPAGFGKSVLMSECARLVPPGTCLVWLDLGG 82

Query: 85  RDADPGRFLERLLEGLQQYCPALGGQAMGLLKMRQRHQPFAFEEWLDGLLDELALYLQAD 144
           R        E+L       C ALG             +P   E   +   D L L     
Sbjct: 83  RMCTVHALYEQL-------CTALG-------------EPACKETGTES--DMLTLLRGVG 120

Query: 145 TPLLLVLDDYHLAQGPVLDRCLQFFLNHLPPGLVLLVTSRQRPGWHLARLRLSRQLVELN 204
            PL ++LDDY     P LD CL   L+  P  +   V+SR++P W L RL L   L EL 
Sbjct: 121 QPLWIMLDDYPRDDCPELDACLDMLLDMGPAPVSWWVSSRRQPAWKLPRLLLQGHLFELE 180

Query: 205 EQDLRLTADESLAVIGRQPTGLRGQALDNLIQRSDGWVAGLRFWQLAASDSADEQALPQA 264
            + L  TA+E   ++      L  ++   L +  +GW AG+    L    +ADEQAL + 
Sbjct: 181 AEALAFTAEELDQILRVHRLTLSPESFQQLQRGMEGWPAGVCLMLL----NADEQALRER 236

Query: 265 LHGGEGLIRDYLLEEVIDRLPADVQAFLDETACQERFCAPLCDAMR---GRHDSAAVLSF 321
           L  G  L+RDY+  EV+  L  +V+  L   A   RF A LCD +    GR     ++  
Sbjct: 237 LVAGTPLLRDYVQREVMAGLTDEVRRALLALARMPRFSAALCDHVLDGIGRE----IVDV 292

Query: 322 LQAHQVFLVPLDEHGHWFRYHHLFSDLLRSRQASESQVALHLRACRWFEAQDLLDEAVEQ 381
           L+  Q+F+  +D  G WFR     + +L+    +     +HLRAC+WF ++  + EAVE 
Sbjct: 293 LKTRQLFIRQIDNCGEWFRLWKPLAQMLQRSGENTVPTQVHLRACQWFASRGEMREAVEH 352

Query: 382 ALRAGHLDVAADLVQSLSEEQLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLA 441
           AL AG  +VAA+ +Q   +EQLL   NV   L+W+ +LP  L  ST RLIVL  WAL ++
Sbjct: 353 ALWAGQPEVAANYLQRYGQEQLLIGDNVSRFLKWRSELPQDLFASTTRLIVLQGWALIIS 412

Query: 442 CQLDAAEELAGYLSRFLPAPSATAQKSMLAQWLALSGVIARGRGDRERTLAYCGEALQSL 501
            +LD  ++    L++F P P A  Q  +LAQW AL G +AR RG+ E     C +AL+ L
Sbjct: 413 ARLDEVDDCLAELAKFFPQPDARRQAQLLAQWQALRGFLARLRGEPE-ARQNCLQALEVL 471

Query: 502 PSKRYGQRLVCLSTLSNLAIADGDFWRARGWNREALELAQRVGNPLFEALAHYDRARVLH 561
               + QR++C   L+  A+A+G+   A+ +N E ++LA+  G+ L+E +   DR ++L 
Sbjct: 472 SDHAWAQRVLCYQVLTQQAMAEGELELAQQYNSEGMKLARLKGSVLYEVMLSVDRIQLLE 531

Query: 562 ARGEVLRALDEVRQGLQRLQGLSAQRLYAVRARLTLYEGYLLVSRLQPAQGRARLRAGLG 621
             GE  RA+  + + LQ L+   + R   +  RL L +G+LL  +      +   + G  
Sbjct: 532 LTGEFERAVGVLNEALQALR--ESVRHSPLIGRLQLLQGHLLAYQGLDEPAQEAYQLGKA 589

Query: 622 EARACRDISVLIGHCVIATLDGREGHFAEAFAELAEAERLMHIWDVPPVYYLAMITLVKC 681
           E   C D     G+  +A L  R   FA A+  L +AERL     VP   +  ++ L+  
Sbjct: 590 ETETCGDSYCFFGYVGLAELAARNHEFACAYHWLRDAERLSQWRHVPEARFRGILPLING 649

Query: 682 ELWLAQGRTDLAESWLQRLGQTYGGEQPAAAPEFHPLLPLHIALQQAALDRIQLRSDDAV 741
             WL QG    A S L ++ + Y G+   +   F+ LLP  +    A +D +  +   A+
Sbjct: 650 VAWLHQGELRKARSALCQVLELYEGQGYLSPSGFYELLP-RVRRYLAVIDVLDGQPARAI 708

Query: 742 QRLACLVKRGQASGGMMLTVSALSQWLALLLDEGKEGQA-AQLLPSLLEAAHGGVMQPMQ 800
             L   V++   +  + L           L  +G+  +A  ++  +L EAA   +++P+ 
Sbjct: 709 AALREQVEQNLQAQRLGLACECRFSLAEALHADGQAVEAELEVRLALGEAARQHLVKPLY 768

Query: 801 PLLEKHPQWLQEQLQAGAACPVQAELLKH-LPPVPIASTGNGEALSGREMAVLELIAQGC 859
            L  + PQWL   L A     ++  LL++   P  +    +   LS RE+ VL LIAQGC
Sbjct: 769 ELHHRQPQWLAAMLPALRGESLRQRLLRYEREPEVVLPAPDETVLSNRELTVLRLIAQGC 828

Query: 860 SNQQISERLFISLHTVKTHASHINSKLGVERRTQAVAKAKSLGLL 904
           SNQ+I+E+LFISLHTVKTHA  IN+KLGV RRTQAVAKAK+L  L
Sbjct: 829 SNQEIAEQLFISLHTVKTHARRINTKLGVARRTQAVAKAKALAWL 873