Pairwise Alignments

Query, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

Subject, 921 a.a., HTH-type transcriptional regulator MalT from Vibrio cholerae E7946 ATCC 55056

 Score =  178 bits (451), Expect = 2e-48
 Identities = 218/922 (23%), Positives = 376/922 (40%), Gaps = 78/922 (8%)

Query: 24  RPPLPDGHVPRLRLCQRLEAGLGGRLLLVNAPAGFGKSSLAIEFCETLPEHWRSLWLGLS 83
           RP      + R R+   L+     +L+L  +PAG+GK+++A ++    P      W  + 
Sbjct: 28  RPGRLHNAIVRPRVLDLLQHATCYKLVLFRSPAGYGKTTMAAQWLADKPNLG---WYSID 84

Query: 84  QRDADPGRFLERLLEGLQQYCPALGGQAMGLLKMRQRHQPFAFEEWLDGLLDELALYLQA 143
             D DP RF+  LL+ + +   A         K+ ++ Q  +       +  E+A Y   
Sbjct: 85  DSDNDPFRFMNYLLQAINK---ATHNACPNAQKLAEKRQFSSLHSLFSEVFAEMADY--- 138

Query: 144 DTPLLLVLDDYHLAQGPVLDRCLQFFLNHLPPGLVLLVTSRQRPGWHLARLRLSRQLVEL 203
                +VLDDYHL     +   ++FFL H+P  L L+VTSR  P    A LR+   ++E+
Sbjct: 139 HGECYVVLDDYHLIHDETIHEAMRFFLKHMPDNLTLVVTSRSTPPLGTANLRVRDLMIEI 198

Query: 204 NEQDLRLTADESLAVIGRQPT-GLRGQALDNLIQRSDGWVAGLRFWQLAASDSADE--QA 260
             + L    +E+     ++ + G+     ++L    +GW + ++   L A        Q 
Sbjct: 199 GNELLAFDTEETTRFFNQRVSDGIDALTANHLRDYVEGWPSAMQLIALQAQHQHRTLAQT 258

Query: 261 LPQALHGGEGLIRDYLLEEVIDRLPADVQAFLDETACQERFCAPLCDAMRGRHDSAAVLS 320
           +    H     + DYL+EEV D L  + + FL + +  + F   L  ++ GR D+ A++ 
Sbjct: 259 IESVSHFNHAHLWDYLVEEVFDLLDDETRYFLMQCSVLDHFDDALVSSLTGRDDALAMIE 318

Query: 321 FLQAHQVFLVPLDEHGHWFRYHHLFSDLL----RSRQASESQVALHLRACRWFEAQDLLD 376
            L    +F+ PL+   +W+R+H+LF++ L    ++R   + Q      A  W EA     
Sbjct: 319 SLNRFGLFISPLEGETNWYRFHNLFAEFLAHQRQARIPQQEQDLQRAAAKAWLEA----- 373

Query: 377 EAVEQALRAGHLDVAADLVQSLSEE---QLLAEQNVGMLLRWKMDLPDSLLISTPRLIVL 433
            A  QALR  HL    +L+ S+  +   ++  +  + +L      L    L   P+L +L
Sbjct: 374 AAPHQALRHAHLAQDTELLASILSQYGWKMFNQGELEVLEAAINQLSPPQLYREPKLCML 433

Query: 434 YSWALGLACQLDAAEELAGYLSRFLPAPSATAQKSMLAQWLALSGVIARGRGDRERTLAY 493
            +W      + +    L    ++ + A +         ++ AL   +A  + + E+ L  
Sbjct: 434 QAWLAQSQHRYNDVGALLAKAAKEMKALNVELSTKEQGEFNALRAQVAINQNEPEKALEL 493

Query: 494 CGEALQSLPSKRYGQRLVCLSTLSNLAIADGDFWRARGWNREALELAQRVGNPLFEALAH 553
              AL  L    Y  R+V  S +  +    G   RA    ++  +LA++         A 
Sbjct: 494 AELALSQLDHTTYRSRIVATSVVGEVNHVLGHLSRALSMMQQTEKLARQYQVYHQALWAL 553

Query: 554 YDRARVLHARGEVLRALDEVRQGLQRLQGLSAQRLYAVRARLTLYEGYLLVSRLQPAQGR 613
             ++ +L A+G V +A  EV+    +L  +  Q+L+ V     L+E +LL  R Q     
Sbjct: 554 LQQSEILLAQGYV-QAAYEVQDNAFKL--IEEQQLHQV----PLHE-FLLRIRAQILWCW 605

Query: 614 ARLRAGLGEARACRDISVLIGH---------CVIATLDGREGHFAEAFAELAEAERLMHI 664
            RL     E  A + +SVL  H          ++A +    G   +A   + + + L+  
Sbjct: 606 NRLDE--AEQAAYKGLSVLENHSQSKHLHCYSMLARIAIGRGELDKAGRFIEQIQHLLK- 662

Query: 665 WDVPPVYYLAMITLVKCELWLAQGRTDLAESWLQRLGQTYGGEQPAAAPEFHPLLPLHIA 724
                V + A  +L     W  +  +     WLQ            A   F  L   +IA
Sbjct: 663 QSTYHVDWTANASLSLLLYWQVKENSTEIRQWLQS-----STRPDKACNHFSQLQWRNIA 717

Query: 725 LQQAALDRIQLRSDDAVQRLACLVKRGQASGGMMLTVSALSQWLALLLDEGKEGQAAQLL 784
             Q  L  +     +A   L  + ++ Q    +  T   L     L + EG + QA   L
Sbjct: 718 RAQIQLGEL----SEARHTLDFIQEQAQEYQLVTDTNRNLIVEALLAITEGDDLQACHKL 773

Query: 785 PSLLEAAH---------------GGVMQPMQPL-----LEKHPQWLQ----EQLQAGAAC 820
              L   +               G +++ +        LE+H   L        Q   + 
Sbjct: 774 KQALRLTNQTGMIGNFLIDGSKIGHLLEKLVHKGELGDLERHRAHLLLKEISTTQRSRSI 833

Query: 821 PVQAELLKHLPPVP-IASTGNGEALSGREMAVLELIAQGCSNQQISERLFISLHTVKTHA 879
               E ++ L   P I        L+ RE  VL LI  G SN+QI+  L ++  T+KTH 
Sbjct: 834 HFDEEFVEKLVNHPNIPELVRTSPLTQREWQVLGLIYSGFSNEQIAHELDVAGTTIKTHI 893

Query: 880 SHINSKLGVERRTQAVAKAKSL 901
            ++  KL +  R +AV  A+ L
Sbjct: 894 RNLYQKLNIANRKEAVQTAEQL 915