Pairwise Alignments

Query, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

Subject, 856 a.a., helix-turn-helix transcriptional regulator from Pseudomonas aeruginosa PA14

 Score =  223 bits (568), Expect = 4e-62
 Identities = 250/887 (28%), Positives = 375/887 (42%), Gaps = 64/887 (7%)

Query: 51  LVNAPAGFGKS-SLAIEFCETLPEHWRSLWLGLSQRDADPGRFLERLLEGLQQYCPALGG 109
           + +APAGFGK+ +LA    E         WL L++ D DP RF  +L+E L +  P LG 
Sbjct: 1   MFSAPAGFGKTCALAALARERTVADQAVAWLSLAEEDDDPARFCRQLIEALGEAVPQLGD 60

Query: 110 QAMGLLKMRQRHQPFAFEEWLDGLLDELALYLQADTPLLLVLDDYHLAQGPVLDRCLQFF 169
            A   L+   R    A  E L G LD  A       PLLLVLDD HL   P +   L   
Sbjct: 61  DAQTYLQNTMRVPVVAVIESLLGDLDRYA------RPLLLVLDDLHLVSNPDIFTGLNRL 114

Query: 170 LNHLPPGLVLLVTSRQRPGWHLARLRLSRQLVELNEQDLRLTADESLAVIGRQPTGLRGQ 229
           + + PPGLVL + +R +P   LA  R    L+E+  ++LRL  +E+   + R    L   
Sbjct: 115 VQYAPPGLVLALGTRSQPALSLATWRAKGLLLEIGLEELRLGFEETREYLERSGLYLDEP 174

Query: 230 ALDNLIQRSDGWVAGLRFWQLAASDSADEQALPQALHGGEGLIRDYLLEEVIDRLPADVQ 289
            L  L  +++GWV G+    L        Q +   L G +  +  YLL  V +RLP D+Q
Sbjct: 175 CLKALYGQTEGWVVGVHLVSLWLRQQPQVQEMA-LLDGDKQAVSAYLLAAVFERLPGDLQ 233

Query: 290 AFLDETACQERFCAPLCDAMRGRHDSAAVLSFLQAHQVFLVPLDEHGHWFRYHHLFSDLL 349
             L       +    L +A+ GR D  A+L  L++ Q+FL+PLD    W+R+H LF+D L
Sbjct: 234 EALLALGVASQLSGDLANALTGRQDGQALLERLESMQLFLLPLDRERQWYRFHLLFADFL 293

Query: 350 RSRQASESQ---VALHLRACRWFEAQDLLDEAVEQALRAGHLDVAADLVQSLSEEQLLAE 406
           R+R           LH  A  WF    +   A+E A  A   ++ A LV     E L+  
Sbjct: 294 RNRLRDSDPDRFKQLHFNASLWFTNHHMPTFAIEHACAAEDPEMIAALVDGCGLE-LINR 352

Query: 407 QNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLACQLDAAEELAG-YLSRFLPAPSATA 465
             + ++ RW+  +PD +    P L++   W+      L  A  +    L+R+  +     
Sbjct: 353 GQLSLIYRWRKHVPDEIAERYPILVLTDVWSRASDLSLGEANRIIDELLARWGESRGDGP 412

Query: 466 QKSMLAQWLALSGVIARGRGDRERTLAYCGEALQSLPSKRYGQRLVCLSTLSNLAIADGD 525
                   LA+  V+A  + D E  +     AL      + GQ    L     +  A   
Sbjct: 413 MGDQYLSALAVKAVVALQKDDLELCI-----ALARRVEVQLGQNAAFLEVAVLITAALAQ 467

Query: 526 FWRARG-WNREALELAQR-----VGNPLFEALAHYDRARVLHARGEVLRALDEVRQGLQR 579
             R +G   R  L LAQ+      G  L   LA+ +    L  +G+V +A   + +  QR
Sbjct: 468 VVRGQGDQARRLLGLAQQRNHFLEGRYLDMQLANVEVILALE-QGQVKQAQLLIERLRQR 526

Query: 580 LQGLSAQRLYAVRARLTLYEGYLLVSRLQPAQGRARLRAGLGEARACRDISVLI-GHCVI 638
            + L  +   A+ A  T+ E      R++      RL   LG       I     G   +
Sbjct: 527 ARPLFEKSRSAL-ALPTITEALTAYYRIELDGLEERLGWALGHVDVINPIDFYAQGQICL 585

Query: 639 ATLDGREGHFAEAFAELAEAERLM---HIWDVPPVYYLAMITLVKCELWLAQGRTDLAES 695
           A      G   EA A LA  + L      W      + A     +  L L     D  + 
Sbjct: 586 ARTQRLLGRPKEALASLAAMQALASRNQSW-----RFFAQAMAEEINLILQDSGPDRLKR 640

Query: 696 WLQRLGQTYGGEQPAAAPEFHPLLPLHIALQQAALDRIQLRS--DDAVQRLACLVKRGQA 753
             QRL ++    + AA        P++ +L  + +  +Q R    +A+  +  L  RG  
Sbjct: 641 AEQRL-KSVDWNKMAAHYRNMAFNPVNWSLGVSRVRLLQGRGHFSEALHEITQL--RGTL 697

Query: 754 SGG------MMLTVSALSQWLALLLDEGKEGQAAQLL-PSLLEAAHGGVMQPMQPLLEKH 806
             G      + L + A   +  L    G + +A  LL   L+ A   GV    + L  + 
Sbjct: 698 QPGWHGLQRLRLDILAALSYQRL----GYQERANSLLGECLINAEREGV----RSLFIEE 749

Query: 807 PQWLQEQLQAGAACPVQAELLKHLPPVPIASTGNG---------EALSGREMAVLELIAQ 857
              +++ LQ   +   Q  L   +  +     G G         E L+ RE  V+ L AQ
Sbjct: 750 GDGIRQLLQQLESTERQPALQTFIRGLLGIWPGQGVRKPQDALEEGLTEREREVVCLAAQ 809

Query: 858 GCSNQQISERLFISLHTVKTHASHINSKLGVERRTQAVAKAKSLGLL 904
           G SN++I +RL ++L TVK H  +I  KL V  RTQA+ +A+ L LL
Sbjct: 810 GLSNEEIGQRLSLALGTVKWHLHNIYEKLKVRNRTQAIRRARELSLL 856