Pairwise Alignments

Query, 628 a.a., putative adhesin (DUF1302) (from data) from Pseudomonas putida KT2440

Subject, 680 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  336 bits (861), Expect = 2e-96
 Identities = 231/693 (33%), Positives = 342/693 (49%), Gaps = 106/693 (15%)

Query: 13  LPLAVSLASTLASPAFAVSFNIGEIEGQFDSSLSIGASWSTANPN-KNLIGVNNGGK--- 68
           L +A +L+  + S   AV+F+ G ++G FDS+ + GASW     +    IG  N  +   
Sbjct: 15  LGVASALSLLMVSNVNAVAFDWGAVQGSFDSTWTAGASWRVGERDWAGQIGKVNQPQFDW 74

Query: 69  ---------------------GLSQTSDDGHLNFKKGETFSKIFKGIHDLELKYGDTGVF 107
                                  S  +D  +L + +G+T S+I KG+H+L LKY + G+F
Sbjct: 75  SNYTAFGNTKYTSAEIWAQPGSYSSNNDLSNLLYSQGDTTSEIVKGLHELSLKYENYGLF 134

Query: 108 VRGKYWYDFELKDENREFKDI--------SDSNRKEGAKSSGAELLDAFVYHNYSIGD-- 157
            RG Y+YD +L D N +F D            NR    +     LLDAFVY N+ + D  
Sbjct: 135 ARGMYFYDRKLNDGNYDFNDPLTGKEYDPCQDNRASEVQCKDIRLLDAFVYANFDLNDGA 194

Query: 158 QPGSVRFGKQVVSWGESTFIGGGINSINPIDVSAFRRPGAEIKEGLIPVNMFYISQSLTD 217
            P S+R G QVVSWGEST I  GI  INP+D++    PGAE+KE   P  M + S  +T+
Sbjct: 195 NPLSIRVGNQVVSWGESTLIAHGIGEINPVDLNILNAPGAELKEAFRPQGMVWASLGITE 254

Query: 218 NLSAEAFYQLEWDQTVVDNCGTFFS--------------------QPDIIADGCTDNLR- 256
           NLS EAFYQ +W+   V   G+ F+                     PDI  D      + 
Sbjct: 255 NLSVEAFYQYDWEPIWVPTPGSIFATNDFAGFGGYNQNAQLGFNANPDINLDFVMQEYQR 314

Query: 257 ---VLNSSRTVPGAAQQFLATRGVNINEEGVMVRRGADRDARDSGQFGVAMRYMFEPL-D 312
              ++ S +T+P    Q L    +    +  +V+   ++   + GQ+G+ + Y    L D
Sbjct: 315 LAGMIASGQTIP---TQQLVAMALAYPTKVTLVQD--EQSPSNDGQYGIKLGYYAPELGD 369

Query: 313 TEFGAYFMNYHSRAPIFSATGAPPSVFAGLSALPA------QLRALAPLIVAGNSEYFVE 366
           TEFG YFMNYHSR P+ S T A  S  A LS L         +     L +   S+  + 
Sbjct: 370 TEFGFYFMNYHSRRPLISGTAADFSTGALLSDLAVLGQNAGDINRDLLLSLKSFSKAQIV 429

Query: 367 YPEDIRLYGLSFSTTLPTGTAWSGEVSYRPNAPVQLNTTDILFAG---------VRPIGG 417
           YPEDI+LYG SF+T+L   T+   E+++R + P+Q++  ++LFAG         +RP   
Sbjct: 430 YPEDIKLYGFSFNTSLGD-TSVGAEIAHRQDEPLQIDDVELLFAGMPQQLANAGIRPDFN 488

Query: 418 ALSNASLLTGTPGQDLHGYRRKEITQFQTTLTHFFDQVMGASRMTVVGEVGVTHVGGLEN 477
            +S    +   PG  + G+ R++ TQ Q T TH F   +G   +T++ EVG   +  +  
Sbjct: 489 GISQIDGVK--PGDTVDGFIRRDTTQAQATFTHLFGPTLGLDNLTMLAEVGGVWIHDMPG 546

Query: 478 AHDTRYGRDPVFGPGPLPSTGGADTCQALNGSTIAGAGAGASTANLNRKCENDGYTTSTS 537
             + R       GPG   S G  D    +                L+   E + + T  +
Sbjct: 547 FDELRLN-----GPGTARSGGNPDMPGIIQA--------------LHNGPETNPFPTDFA 587

Query: 538 WGYRGRVIWDYNDVFAGINLKPSVAWSHDVSGYSPGPGANFEEGRKAVSLGLDAEYQNTY 597
           WGYR     ++N++FAG+N+ P + +SHDV G +P P   F EGRK+V+LGL+ EYQN +
Sbjct: 588 WGYRLVAKAEFNNLFAGVNMSPRMIFSHDVDGITPDPMFLFTEGRKSVALGLNFEYQNRW 647

Query: 598 TASLSYTNFFDGKYST--VDDRDFVALSFGVNF 628
            A LSY NFF G  +T  + DRD++  SF + +
Sbjct: 648 GADLSYNNFFGGVGTTNAMADRDYI--SFNIKY 678