Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 560 a.a., AMP-dependent synthetase and ligase from Pseudomonas syringae pv. syringae B728a

 Score =  968 bits (2502), Expect = 0.0
 Identities = 470/560 (83%), Positives = 513/560 (91%)

Query: 1   MLQTRIIKPAEGAYAYPLLIKRLLMSGSRYEKTREIVYRDQMRLTYPQLNERIARLANVL 60
           MLQTR++ PA+GAY  PLLIKRLL+SG RYEKTREI+YRD +R TY  LNERI RLANVL
Sbjct: 1   MLQTRVLPPADGAYQCPLLIKRLLLSGGRYEKTREIIYRDSVRYTYATLNERICRLANVL 60

Query: 61  TEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVVHTINVRLSPEQILYTMNHAEDRVVL 120
           T AGVKAGDTVAVMDWDSHRYLECMFAIPMIGAV+HT+NVRLSPEQI YT+NHA+DR+VL
Sbjct: 61  TAAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVIHTVNVRLSPEQIAYTINHADDRLVL 120

Query: 121 VNSDFVGLYQAIAGQLTTVDKTLLLTDGPDKTAELPGLVGEYEQLLAAASPRYDFPDFDE 180
           VNS+F GLYQA++G L+TV+KTLLLTD PDKTAELP LVGEYE LLAAASP Y F DFDE
Sbjct: 121 VNSEFTGLYQAMSGHLSTVEKTLLLTDLPDKTAELPNLVGEYETLLAAASPEYVFEDFDE 180

Query: 181 NSVATTFYTTGTTGNPKGVYFSHRQLVLHTLAEASVTGSIDSVRLLGSNDVYMPITPMFH 240
           NSVATTFYTTGTTGNPKGVYF+HRQLVLHT+  A++ G IDS RLLG++DVYMPITPMFH
Sbjct: 181 NSVATTFYTTGTTGNPKGVYFTHRQLVLHTMGVATIMGCIDSTRLLGTDDVYMPITPMFH 240

Query: 241 VHAWGIPYAATMLGMKQVYPGRYEPDMLVKLWREEKVTFSHCVPTILQMLLNCPNAQGQD 300
           VHAWGIPYAATMLG+KQVYPGRY+P++LV+LWR E VTFSHCVPTILQMLLN  +AQ  D
Sbjct: 241 VHAWGIPYAATMLGLKQVYPGRYDPELLVELWRRENVTFSHCVPTILQMLLNAKSAQNVD 300

Query: 301 FGGWKIIIGGSSLNRSLYQAALARGIQLTAAYGMSETCPLISAAHLNDELQAGSEDERVT 360
           FGGWKIIIGGSSL RSLYQAA +RGIQLTAAYGMSET PLIS AH+N+EL+AGSEDER+T
Sbjct: 301 FGGWKIIIGGSSLTRSLYQAAKSRGIQLTAAYGMSETGPLISVAHINEELKAGSEDERIT 360

Query: 361 YRIKAGVPVPLVEAAIVDGEGNFLPADGETQGELVLRAPWLTMGYFKEPEKSEELWQGGW 420
           YRIKAGVP  LVEAAI+D +GNFLPADGETQGELVLRAPWLT  YF+EPEK  ELW GGW
Sbjct: 361 YRIKAGVPGMLVEAAIIDQQGNFLPADGETQGELVLRAPWLTGSYFREPEKGAELWAGGW 420

Query: 421 LHTGDVATLDGMGYIDIRDRIKDVIKTGGEWVSSLDLEDLISRHPAVREVAVVGVADPQW 480
           LHTGDVATLDGMG+IDIRDRIKDVIKTGGEWVSSL+LEDL SRHPAVREVAVVG+ADPQW
Sbjct: 421 LHTGDVATLDGMGFIDIRDRIKDVIKTGGEWVSSLELEDLCSRHPAVREVAVVGIADPQW 480

Query: 481 GERPFALLVARDGHDIDAKALKEHLKPFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKK 540
           GERPFALLV RDGH +DAK LKEHLKPFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKK
Sbjct: 481 GERPFALLVIRDGHQLDAKGLKEHLKPFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKK 540

Query: 541 RIRQDIVQWQASNSAFLSTL 560
           R+R DIV+WQ+SNSAFLSTL
Sbjct: 541 RMRLDIVEWQSSNSAFLSTL 560