Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 542 a.a., fatty-acid--CoA ligase from Rhodopseudomonas palustris CGA009

 Score =  333 bits (854), Expect = 1e-95
 Identities = 194/546 (35%), Positives = 305/546 (55%), Gaps = 18/546 (3%)

Query: 16  YPLLIKRLLMSGSRYEKTREIVYRDQ----MRLTYPQLNERIARLANVLTEAGVKAGDTV 71
           +PLL  R++   +R    +E+V R      +R TY Q+++R  +++ +L  AG+K GD V
Sbjct: 8   WPLLCHRIIEHAARIHGNQEVVTRSVEGPIVRTTYAQIHQRALKVSQMLDRAGIKLGDRV 67

Query: 72  AVMDWDSHRYLECMFAIPMIGAVVHTINVRLSPEQILYTMNHAEDRVVLVNSDFVGLYQA 131
           A + W++ R+LEC + I  IGA+ HT+N RL P+QI + +NHA+DRV++ +  F+ + + 
Sbjct: 68  ATIAWNTARHLECWYGIMGIGAICHTVNPRLFPDQIAWIVNHAQDRVMITDLTFIPVLEK 127

Query: 132 IAGQLTTVDKTLLLTDGPDKTAELPGLVGEYEQLLAAASPRYDFPDFDENSVATTFYTTG 191
           IA Q+ +V++ ++LTD              YE+ L  A   +++  FDEN+ A   YT+G
Sbjct: 128 IADQIPSVERFVVLTDAEHMPQTTLKNAIAYEEWLKEADGDFEWKTFDENTAAAMCYTSG 187

Query: 192 TTGNPKGVYFSHRQLVLHTLAEASVTGSIDSVRLLGSNDVYMPITPMFHVHAWGIPYAAT 251
           TTG+PKGV +SHR  VLH L    +  + D++    + D  +P+ P+FH ++WGI ++A 
Sbjct: 188 TTGDPKGVLYSHRSNVLHAL----MANNPDALGTRAA-DTMLPVVPLFHANSWGIAFSAP 242

Query: 252 MLGMKQVYPG-RYEPDMLVKLWREEKVTFSHCVPTILQMLLNCPNAQGQDFGGWKIII-G 309
            +G K V PG + +   + +L   EKVT +  VPT+  MLL     +       K+++ G
Sbjct: 243 SMGTKLVMPGAKLDGASVYELLSTEKVTHTAGVPTVWLMLLQYMQKEKLTLPHLKMVVCG 302

Query: 310 GSSLNRSLYQAALARGIQLTAAYGMSETCPLISAAHLNDELQAGSEDERVTYRIKAGVPV 369
           GS++ RS+ +A +  G +   A+GM+E  PL + A L       + D R+      G P 
Sbjct: 303 GSAMPRSMIKAFVDMGAEARHAWGMTEMSPLGTLATLKPPFDQTTGDARLDVLATQGYPP 362

Query: 370 PLVEAAIVDGEGNFLPADGETQGELVLRAPWLTMGYFKEPEKSEELWQGGWLHTGDVATL 429
             V+  I D  G  +  DG+T G L +  P +   Y++  +  E L   G+  TGDVAT+
Sbjct: 363 FGVQMKITDDAGKDVDWDGKTFGRLKVSGPAIAKAYYRVDK--EILDDAGFFDTGDVATI 420

Query: 430 DGMGYIDIRDRIKDVIKTGGEWVSSLDLEDLISRHPAVREVAVVGVADPQWGERPFALLV 489
           D  GY+ I DR KDVIK+GGEW+SS+DLE+L   HP V E AV+GV  P+W ERP  +  
Sbjct: 421 DQDGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPLLICQ 480

Query: 490 ARDGHDIDAKALKEHLKPFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKKRIRQDIVQW 549
            +     D    ++ +  +++ G I KW +P  I  V  IP T+ GK+ K  +R     +
Sbjct: 481 LKP----DVTCTRDEILQYMD-GKIAKWWMPDDIVFVEAIPHTATGKILKTALRDQFKTY 535

Query: 550 QASNSA 555
               +A
Sbjct: 536 TLPGAA 541