Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 549 a.a., acyl-CoA synthetase from Rhodopseudomonas palustris CGA009

 Score =  247 bits (630), Expect = 1e-69
 Identities = 175/526 (33%), Positives = 267/526 (50%), Gaps = 28/526 (5%)

Query: 30  YEKTREIVYRDQMRLTYPQLNERIARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIP 89
           Y +   +VY  +   T+ +   R  R A+ LT +G+  GDTVAVM  +    +E  FA+P
Sbjct: 35  YPEMTSVVYEGR-HYTWKETRARCRRFASWLTRSGIGRGDTVAVMLPNVPAMVEVHFAVP 93

Query: 90  MIGAVVHTINVRLSPEQILYTMNHAEDRVVLVNSDFVGLYQAIAGQLTTVDKTLLLTDGP 149
           M GAV++ +N+RL    I + ++H   +++LV+ +F  +  A A +L T  K L++ D  
Sbjct: 94  MAGAVLNALNIRLDAAAIAFQLDHGGAKIILVDPEFSSVV-AEALKLMTKPKPLVI-DVD 151

Query: 150 DKTAELPGLVGEYEQLLAAASPRYDFPDF---DENSVATTFYTTGTTGNPKGVYFSHRQL 206
           DK       +GE E   A AS    F      DE    +  YT+GTTGNPKGV   HR  
Sbjct: 152 DKMYPGSHRIGELEYEYAVASGDPTFAGHRPEDEWDAISLGYTSGTTGNPKGVVTHHRGA 211

Query: 207 VLHTLAEASVTGSIDSVRLLGSNDVYMPITPMFHVHAWGIPYAATMLGMKQVYPGRYEPD 266
            L+ ++   + G+      LG + VY+   P+FH + W  P+         V   + +P 
Sbjct: 212 YLNAVSNI-LAGN------LGQHPVYLWTLPIFHCNGWCFPWTLAAAAGINVCLRKVDPA 264

Query: 267 MLVKLWREEKVTFSHCVPTILQMLLNCPNA-QGQDFGGWKIIIGGSSLNRSLYQAALARG 325
            + +L  +  VT     P +   L+N P A +G        +I G++   ++   A   G
Sbjct: 265 KIFELIPKHGVTHMCGAPIVYNALINAPEAPKGVPTKPVVGLIAGAAPPMAVLAGAETIG 324

Query: 326 IQLTAAYGMSETCPLISAAHLN---DELQAGSEDERVTYRIKAGVPVPLVEAAIVDGEGN 382
           I+LT  YG++E     S        DEL      ER   + + GVP P+ EA  V     
Sbjct: 325 IKLTHVYGLTEVYGPASVCAEQPGWDELPVA---ERAKLKRRQGVPYPMQEAVTVLNPET 381

Query: 383 F--LPADGETQGELVLRAPWLTMGYFKEPEKSEELWQGGWLHTGDVATLDGMGYIDIRDR 440
              +P DGET GE++ R   +  GY K  + ++E   GGW HTGD+  LD  GY+ I+DR
Sbjct: 382 MQEVPRDGETIGEVMFRGNIVMKGYLKNEKATKEALAGGWFHTGDLGVLDADGYVIIKDR 441

Query: 441 IKDVIKTGGEWVSSLDLEDLISRHPAVREVAVVGVADPQWGERPFALLVARDGHDIDAKA 500
            KD+I +GGE VSS+++ED++ +HPA+   AVV   DP+WGE P A +  +DG    A A
Sbjct: 442 SKDIIISGGENVSSVEVEDVLYKHPAILFAAVVAKPDPKWGEVPCAFVELKDG----ASA 497

Query: 501 LKEHLKPFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKKRIRQDI 546
            +  +  +  + H+  +  P  I + + IPKTS GK+ K  +R  +
Sbjct: 498 TEAEIIAYCRE-HLPGFKTPKSI-VFSSIPKTSTGKIQKFMLRDQV 541