Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 519 a.a., long-chain fatty acid--CoA ligase from Rhodopseudomonas palustris CGA009

 Score =  234 bits (596), Expect = 8e-66
 Identities = 164/504 (32%), Positives = 258/504 (51%), Gaps = 29/504 (5%)

Query: 45  TYPQLNERIARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVVHTINVRLSP 104
           ++ ++ +R+ARLA+V    GV  G+ VA++  + H Y+EC FA+   G VV  IN R S 
Sbjct: 28  SHGEMLDRVARLASVFRRLGVTGGERVAILAANGHEYIECYFAVLWAGGVVVPINSRFSL 87

Query: 105 EQILYTMNHAEDRVVLVNSDFVGLYQAIAGQLTTVDKTLLLTDGPDKTAELPGLVGEYEQ 164
            +++  +  AE  V++ +  F+     +A     +   +    G    A LP L  +YE 
Sbjct: 88  AEMIEQVTDAEPIVLVSDRSFLDSALQLADACRGITAVVAAAPG---AAGLPKLY-DYEA 143

Query: 165 LLAAASPRYDFPDFDENSVATTFYTTGTTGNPKGVYFSHRQLVLHTLAEASVTGSIDSVR 224
            LA   P  D    +++ +A  FYT GTTG  KGV  SHR L ++ +  +   G  ++  
Sbjct: 144 ALADEKPCADAGRGNDD-LACLFYTGGTTGRAKGVMLSHRNLWVNAVVTSLSFGFDETTV 202

Query: 225 LLGSNDVYMPITPMFHVHAWGIPYAATMLGMKQVYPGRYEPDMLVKLWREEKVTFSHCVP 284
            L +        P+FH+ A    Y  +++G + V   R+ P  ++      KVT +  VP
Sbjct: 203 ALHAG-------PLFHLGAGARVYTTSIMGGRHVVIPRFAPKDVLAAISHHKVTVATFVP 255

Query: 285 TILQMLLNCPNAQGQDFGGWKIII-GGSSLNRSLYQAALAR--GIQLTAAYGMSETCPLI 341
           T+L M+L  P+    D    K+I  G S +  ++ Q  L R   I+   +YGM+E  P+ 
Sbjct: 256 TMLGMILQLPDLDSYDLSSLKLITYGASPMPEAVLQECLRRFPSIRFGQSYGMTELSPVA 315

Query: 342 SAAHLNDELQAGSEDERVTYRIK-AGVPVPLVEAAIVDGEGNFLPADGETQGELVLRAPW 400
           +    +D L +        +R++ AG PV   E  IVD E   L   GE  GE+V+R P 
Sbjct: 316 TILSPDDHLPSAPR-----HRLRSAGRPVVSAEVRIVDAEDRQLKP-GEV-GEVVVRGPM 368

Query: 401 LTMGYFKEPEKSEELWQGGWLHTGDVATLDGMGYIDIRDRIKDVIKTGGEWVSSLDLEDL 460
           + MGY+K+PE +  + +GGW+HTGD    D  GY+ I DRIKD+I TGGE V S+++E+ 
Sbjct: 369 VMMGYWKQPELTAHVLRGGWMHTGDSGRFDTEGYLYISDRIKDMIITGGENVYSIEVENA 428

Query: 461 ISRHPAVREVAVVGVADPQWGERPFALLVARDGHDIDAKALKEHLKPFVEQGHINKWAIP 520
           I+ HP V + AV+GV   +WGE   A++V R G  +    L    +  +       +  P
Sbjct: 429 IAAHPDVLQCAVIGVPHAKWGEAVHAVVVRRPGSSLTTDELITFCRSVIAD-----YKSP 483

Query: 521 SQIALVTE-IPKTSVGKLDKKRIR 543
             I    + +P +SV K++K  +R
Sbjct: 484 RSIEFRDDPLPLSSVNKINKAALR 507