Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 539 a.a., medium-chain-fatty-acid--CoA ligase AlkK from Phaeobacter inhibens DSM 17395

 Score =  314 bits (805), Expect = 5e-90
 Identities = 190/515 (36%), Positives = 281/515 (54%), Gaps = 38/515 (7%)

Query: 44  LTYPQLNERIARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVVHTINVRLS 103
           +T+  ++    +LA  L   G+  G     + W++ R+LE  F +   G V HTIN RL 
Sbjct: 40  VTWGDIDANARKLAAALGRLGIAQGARCGTIAWNNRRHLEIYFGVSGGGYVCHTINPRLK 99

Query: 104 PEQILYTMNHAEDRVVLVNSDFVGLYQAIAGQLTTVDKTLLLTDGP---DKTAELPGLVG 160
           PEQ++Y +NHAED+V+ +++ FV     +  Q TTV   +++  GP   D  A++ G++ 
Sbjct: 100 PEQLIYIINHAEDQVLFIDTTFVPAVAQLRAQFTTVQHIVVM--GPKDADIAAQIEGVLF 157

Query: 161 EYEQLLAAASPRYDFPDFDENSVATTFYTTGTTGNPKGVYFSHRQLVLHTLAEASVTGSI 220
            Y+ +L A +  YD+PD DEN  ++  YT+GTTGNPKGV ++HR  VLHT+      G+ 
Sbjct: 158 -YDDVLDAEAAGYDWPDLDENLPSSLCYTSGTTGNPKGVEYTHRTSVLHTIG-----GNQ 211

Query: 221 DSVRLLGSNDVYMPITPMFHVHAWGIPYAATMLGMKQVYPGRYEPDM-LVKLWREEKVTF 279
                L + D  + + PMFHV+AWG PY    +G K V PG +   + L +L   EKVT 
Sbjct: 212 PDGLALRARDTVLAVVPMFHVNAWGTPYMTAAVGAKLVLPGPHLDGVSLARLIDAEKVTV 271

Query: 280 SHCVPTILQMLLNCPNAQGQDFGGW------KIIIGGSSLNRSLYQAALAR-GIQLTAAY 332
           +  VPTI   LL     QG +  G       + I+GGS+L   +      + G+ L  A+
Sbjct: 272 ALGVPTIWMGLL-----QGLEETGCTAESLERTIVGGSALPTVMIPTFRDKYGVDLVHAW 326

Query: 333 GMSETCPLISAAHLNDELQAGSE-DERVTYRIKAGVPVPL--VEAAIVDGEGNFLPADGE 389
           GM+ET P+     LN  LQ  +E D     +++ G   P+  ++  IVD  G  LP DGE
Sbjct: 327 GMTETSPI---GTLNQLLQKHNELDAEAQAKLREGQGRPMYGIDLRIVDDSGAVLPHDGE 383

Query: 390 TQGELVLRAPWLTMGYFKEPEKSEELWQGGWLHTGDVATLDGMGYIDIRDRIKDVIKTGG 449
           TQG L +   W+   YF+  E +  L   GW  TGDVAT+D  GY+ IRDR KD+IK+GG
Sbjct: 384 TQGNLQICGHWVIDSYFRAGETA--LTDDGWFDTGDVATIDDDGYMIIRDRSKDIIKSGG 441

Query: 450 EWVSSLDLEDLISRHPAVREVAVVGVADPQWGERPFALLVARDGHDIDAKALKEHLKPFV 509
           EW+S+++LED+   HP + + A +    P+W ERP  + V R G   +A  L  +     
Sbjct: 442 EWISTVELEDIAMSHPNIAQAAAIAAKHPKWDERPVVIAVKRSGDVTEADLLAHY----- 496

Query: 510 EQGHINKWAIPSQIALVTEIPKTSVGKLDKKRIRQ 544
            QG +  W IP ++  V  +P    GK+ K  +R+
Sbjct: 497 -QGKVASWQIPDRVIFVESLPLGGTGKVQKNTLRE 530