Pairwise Alignments

Query, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

Subject, 539 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Sphingomonas koreensis DSMZ 15582

 Score =  308 bits (788), Expect = 5e-88
 Identities = 186/540 (34%), Positives = 280/540 (51%), Gaps = 17/540 (3%)

Query: 16  YPLLIKRLLMSGSRYEKTREIVYR----DQMRLTYPQLNERIARLANVLTEAGVKAGDTV 71
           + L + RL+    R    REIV R     + R  +  +     +LA  L   G+K GD V
Sbjct: 8   FELRVPRLIDHAEREYGDREIVSRWFDGSETRTNWAGIARDSRKLAQALERMGIKKGDRV 67

Query: 72  AVMDWDSHRYLECMFAIPMIGAVVHTINVRLSPEQILYTMNHAEDRVVLVNSDFVGLYQA 131
           A M  +  R+L        +G V+HTIN RL  +Q+ +  NHAEDRV++ +  F  +   
Sbjct: 68  ATMAMNHSRHLVAWHGTIGMGGVIHTINPRLFEDQLAFIGNHAEDRVLMYDRMFQPIVDK 127

Query: 132 IAGQLTTVDKTLLLTDGPDKTAELPGLVGEYEQLLAAASPRYDFPDFDENSVATTFYTTG 191
           +  Q  T++  ++   G +  A   G    +E ++ A    Y + + DE       YT+G
Sbjct: 128 MKPQWKTIEHYIVFDPGSEAGAGADG-PDSFEAVIGAEDGNYAWVEGDEREPCMLCYTSG 186

Query: 192 TTGNPKGVYFSHRQLVLHTLAEASVTGSIDSVRLLGSNDVYMPITPMFHVHAWGIPYAAT 251
           TTGNPKGV ++HR  V+H +AE        +V  L +  V +P+ PMFH   WG+P+AA 
Sbjct: 187 TTGNPKGVLYTHRSSVIHAMAEIQ-----PAVFDLSTQSVVLPVVPMFHAVGWGMPFAAP 241

Query: 252 MLGMKQVYPGRYEPDMLVKLWREEKVTFSHCVPTILQMLLNCPNAQGQDFGGWKII-IGG 310
           M+G+K V     E  +L +L   EKVT +  VPT+   +    +  G      K++ IGG
Sbjct: 242 MVGVKLVMSAINEGKVLCELMNREKVTHTAGVPTVWFAMFQHMDETGDVPAYLKVVTIGG 301

Query: 311 SSLNRSLYQAALARGIQLTAAYGMSETCPLISAAHLNDELQAGSEDERVTYRIKAGVPVP 370
           S+  R++ +  +  G ++  A+GM+ET P+ +    + +    S + +V   +  G    
Sbjct: 302 SAAPRAMIERIMKMGARVNHAWGMTETSPIGTMGSPSADWDDLSFEAKVDKMVCQGRAPF 361

Query: 371 LVEAAIVDGEGNFLPADGETQGELVLRAPWLTMGYFKEPEKSEELWQGGWLHTGDVATLD 430
            VE   VD  GN LP DGE+ G L +R PW+   YFK+ E    L   GW  TGDVA L 
Sbjct: 362 GVELRTVDDAGNLLPRDGESSGRLQVRGPWIIKQYFKD-ESGPCLTADGWFDTGDVAVLH 420

Query: 431 GMGYIDIRDRIKDVIKTGGEWVSSLDLEDLISRHPAVREVAVVGVADPQWGERPFALLVA 490
             G + I DR KDVIK+GGEW+SS++LE+     P V E A +G+  P+W ERP  L++ 
Sbjct: 421 PDGIMQITDRAKDVIKSGGEWISSVELENAAVGCPGVAEAAAIGIHHPKWDERPLLLVIR 480

Query: 491 RDGHDIDAKALKEHLKPFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKKRIRQDIVQWQ 550
           + G ++ A  +++HL       H+ KW +P +I  V  +P T+ GKL K  IR     +Q
Sbjct: 481 KPGSEVTADQIQQHLAK-----HVAKWWLPDEIHFVEALPHTATGKLLKTAIRDQYKGFQ 535